Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1291 ATGGCTTCCAAAGTCTCTTCCTCCCTTGCTCTTTTCCTCACACTAAACATTCTCTTCTTTACTCTTGTCTCATCTTGTGGGACATGTGATCAACCAAAACCAAAGCCAAAGCCAAAGCACAACCCCTACCCCAACCCTGGCTCGGGCGGATCCGGTGGATCAGGAGGCTCAGGTGGTTCTGGAGGCTCAGGAAGCTCAGGTAGTTCGAGTGCATCATGTCCCCGTGATGCACTCAAACTAGGAGTATGTGCCAATGTGCTAAACGGTTTAGTAAATGTGACTTTGGGTCAACCACCAGTGACTCCATGCTGCACCCTTATTCAAGGCCTTGCTGACGTGGAGGCTGCAGTGTGCCTCTGCACTGCACTCAAGGCCAACATTTTGGGCATCAACCTTAACCTTCCAATCTCACTTAGCTTGCTTCTCAATAGGGACATAGTAAATAAGTTTCTCGTGTTTACTTATGTAAGTTCCAAGGGAACCAAAGATTGA 492 0.4817 MASKVSSSLALFLTLNILFFTLVSSCGTCDQPKPKPKPKHNPYPNPGSGGSGGSGGSGGSGGSGSSGSSSASCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCTLIQGLADVEAAVCLCTALKANILGINLNLPISLSLLLNRDIVNKFLVFTYVSSKGTKD 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1291 163 MobiDBLite consensus disorder prediction 31 70 - -
Lal16g1291 163 MobiDBLite consensus disorder prediction 47 70 - -
Lal16g1291 163 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lal16g1291 163 CDD HPS_like 71 143 IPR027923 -
Lal16g1291 163 PANTHER - 65 143 - -
Lal16g1291 163 PANTHER - 7 48 - -
Lal16g1291 163 Gene3D - 71 146 IPR036312 -
Lal16g1291 163 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 75 143 IPR036312 -
Lal16g1291 163 SMART aai_6 73 144 IPR016140 -
Lal16g1291 163 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 65 143 - -
Lal16g1291 163 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 48 - -
Lal16g1291 163 Pfam Hydrophobic seed protein 73 143 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1291 Lal-Chr16 9142982 9143652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1291 72 124 Acyl Lipid Metabolism Gene Families AT4G22490 54.717 1.10e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1291 - - gmx:100801985 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1291 16 9142982 9143652 Lal16g1291 16 9142982 9143652 ECH