Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1263 ATGGTTGATCTGTTTGCATGGCTCATATCCTTTTTCATCCTTATTGCATTACTTGTTATTCTCATCTACCAGCTAATGTGCCTGGCAGACTTAGAATTTGATTATATAAATCCGTATGACTCCTCATCTCGAATAAACAAAGTGGTTTTGCCTGAGTTTATTACACAAGGTGTCCTATGCTTCTTCTACCTTGTAACGGGTCATTGGATTATGTCACTGTTCTGCGCTCCTTACCTCTACTATAATGTTAGATTGTATAGACAAGGAAGGCATCTGGTTGATGTTACAGAGATATTCAACTTACTCCCGCATGAAAAGAAGCAGCGGCTTATCAAACTCTTTTATCTTGTTTTTCTCCTTTTCCTGTCTATATTTTGGAGAGTTCCTTGGGAAACATAG 399 0.381 MVDLFAWLISFFILIALLVILIYQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCFFYLVTGHWIMSLFCAPYLYYNVRLYRQGRHLVDVTEIFNLLPHEKKQRLIKLFYLVFLLFLSIFWRVPWET 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1263 132 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Lal16g1263 132 PANTHER CORNICHON-RELATED 1 126 - -
Lal16g1263 132 PANTHER CORNICHON FAMILY PROTEIN 1 126 - -
Lal16g1263 132 SMART Cornichon_2 4 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1263 Lal-Chr16 8871690 8876648 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1263 K20368 - gmx:100799061 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1263 16 8871690 8876648 Lal16g1263 16 8871690 8876648 ECH
Lal15g1354 15 15670121 15672319 Lal16g1263 16 8871690 8876648 LSH