Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1259 ATGGAGTGGTCAGGTTGTACGGATGAATATGAGAAGCTTGTGATTCGGATGAGTACTCCTAGGGTTGTTATAGACAATGCTGTTTGCTCCACAGCAACTATAGTCAAGGTTGATAGTGCCAGAAAACATGGGATTCTTTTGGATGCAGTGCAGGTTCTCACTGATCTGAACCTTTCAATTAAAAAGGCTTATATTTCCTCTGATGGAAGGTGGTTCATGGATGTTTTCCATGTTACAGATCAAAATGGAAACAAATTAACAGATGAGAGTGTTTTAAAATACATTGAACAGTCACTTAGCAGCATTCACTATGGGGGAACAAATGGCTCAAATGGTCTCACTGTCCTAGAATTATCCGGAACCGACCGGATTGGTCTTCTTTCCGAGGTGTTTGGTGTAATGGCTGAGCTGCAATGTGATGTGGTTGAGTCTAAATTTTGGACTCACAATGGCTGCATTGCGTCCCTAATTTATGTAAAAGACTCTATTTCAGGGTCTGCAATTGAGGACTCTAAGAAAATTGAGAGGCTTGAAGCACGTTTAAGTAATGTTTTGAAGGGAGACAGTGACATTAGGAGTGCAAAAGCTTCCATCTCCATGGCTGTTATGCACCCTGAAAGAAGGCTCCACCAAATGATGTTCGCCGACCGCGATTTCCAGAGGAATCCCATCTTTAAATTCACGTCCGATACTCCACTAGTCACAGTGCAAAATTGGGCAGAAAGGGGTTATTCGGTCGTGAATGTTCAGTGCAAGGATCGAACTAAGCTTTTGTTTGATGTTGTATGCAATTTGACACACATGGAATATGTCGTGTTTCACGCAACTATTAACACAACAAGTGATCAAGCATATTTGGAGTTTTATATCAGACACAAGGATGGAACACCAATTAGTTCCGAACCGGAGCGCCAACGAGTAATTCAATGCTTGCAAGCTTCAGTTGAAAGAAGGGCATCTGAGGGTGTTAGGCTAGAATTATACACAGAAAACAAACAGGGTCTTCTAGCAGAGGTAATGAGAACATTTAGAGAAAATGGGTTGAATGTAACAAGGGCTGAGATATCAACTATAGAGGACATGGCTGCAAATATTTTCTATGTAACTGATGCTATTGGGTACCCAGCTGAACCAAAAGTTATAGAATTTGTTAGGCACAAAATTGGTTTAAACAATTTAAAAGTAAAAGAAGTGCCATTGGTATGTCATGAAAAAGCAGATAGAGAAGATCAATCAGTTGGTGTTGGTGGGGCAGTGTTATTGTCTCTTGGGAGCTTAGTGAGAAGGAATTTATACAATTTGGGATTAATCAAATCTTGTTCTTAA 1326 0.4035 MEWSGCTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILLDAVQVLTDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIHYGGTNGSNGLTVLELSGTDRIGLLSEVFGVMAELQCDVVESKFWTHNGCIASLIYVKDSISGSAIEDSKKIERLEARLSNVLKGDSDIRSAKASISMAVMHPERRLHQMMFADRDFQRNPIFKFTSDTPLVTVQNWAERGYSVVNVQCKDRTKLLFDVVCNLTHMEYVVFHATINTTSDQAYLEFYIRHKDGTPISSEPERQRVIQCLQASVERRASEGVRLELYTENKQGLLAEVMRTFRENGLNVTRAEISTIEDMAANIFYVTDAIGYPAEPKVIEFVRHKIGLNNLKVKEVPLVCHEKADREDQSVGVGGAVLLSLGSLVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1259 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Lal16g1259 441 Gene3D - 113 192 - -
Lal16g1259 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Lal16g1259 441 CDD ACT_ACR_3 244 318 - -
Lal16g1259 441 ProSiteProfiles ACT domain profile. 324 400 IPR002912 -
Lal16g1259 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Lal16g1259 441 Pfam ACT domain 325 375 IPR002912 -
Lal16g1259 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Lal16g1259 441 SUPERFAMILY ACT-like 320 384 IPR045865 -
Lal16g1259 441 CDD ACT_ACR_1 32 103 - -
Lal16g1259 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Lal16g1259 441 SUPERFAMILY ACT-like 111 185 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1259 Lal-Chr16 8845470 8848157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1259 - - gmx:100794729 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1259 16 8845470 8848157 Lal16g1259 16 8845470 8848157 ECH