Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1254 ATGGCCTTAGCTATTCGCACTATATCTCTTGCTTTGAAAAGGTTCAGTCCGGTTCAGCCTCCCAATCCGGTTCGGAAGAACAAAGCTTTTTTCTGCAAAATGTCGAACGAGTCAACGCCCTTGACTCACTCTATCACACTACCGAGTCAACATTCCCAACCCGTTCACATTGTTGCTTCCCCTGGTCTCTCCCATTCTGATTTCTGGAGTGCTATTGATTCATCATTATTCAAGCAATGGTTACGTAACTTGGAAACCGAGACCGGCGTTCTAGCCGATGGCACCATGGCTTTGAGGCAAGTTTTAATTCAGGGAGTAGACATGTTCGGAAAGCGCATTGGGTTTCTCAAGTTCAAGGCTGATATTATTGACAAAGAAACAGGGAATAAGATTCCAGGCATTGTATTTGCGAGAGGACCAGCTGTAGCTGTTTTGATACTTTTGGAATCAGAGGGTGAGACTTATGCCGTTCTTACTGAACAGGTAGATGTTGGAGCATGCGAATTTCTTATTTATAAGGCAAGGATTCCTGTTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGACGACAGAGGCGATTTTGTTGGCACTGCAGTTCGTGAGGTTGAAGAAGAGACTGGCATAAAGTTAAGTCTAGAGGACATGATTGACTTGACTGCGTTCTTGGATCCTTCAACTGGATGCAGAGTGATCCCCTCTCCGGGAGGATGCGATGAAGAAATCAGTATCTTTCTATACCGCAGGCGTGTGGATAAAGAGATTATAACACAGTTACAGGGAAAGCAAACTGGCCTTATCGAACATGGGGAGCTGATTAAGGTTCATGTAGTACCATACAAAAAGCTTTGGCGCGCTACGGCAGATTCCAAGGTTTTGATGGCTATTGCACTGTTAGAAATGGCTACAAAAGGAGGGCTACTGCCTCCTTTTGCAACCTAA 948 0.4462 MALAIRTISLALKRFSPVQPPNPVRKNKAFFCKMSNESTPLTHSITLPSQHSQPVHIVASPGLSHSDFWSAIDSSLFKQWLRNLETETGVLADGTMALRQVLIQGVDMFGKRIGFLKFKADIIDKETGNKIPGIVFARGPAVAVLILLESEGETYAVLTEQVDVGACEFLIYKARIPVGRIILELPAGMLDDDRGDFVGTAVREVEEETGIKLSLEDMIDLTAFLDPSTGCRVIPSPGGCDEEISIFLYRRRVDKEIITQLQGKQTGLIEHGELIKVHVVPYKKLWRATADSKVLMAIALLEMATKGGLLPPFAT 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1254 315 Pfam NUDIX domain 138 288 IPR000086 -
Lal16g1254 315 SUPERFAMILY Nudix 115 301 IPR015797 -
Lal16g1254 315 CDD ADPRase_NUDT5 138 303 - -
Lal16g1254 315 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 109 306 - -
Lal16g1254 315 ProSiteProfiles Nudix hydrolase domain profile. 137 302 IPR000086 -
Lal16g1254 315 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 23 311 - -
Lal16g1254 315 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 23 311 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1254 K18447 - gmx:100818255 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1254 16 8780468 8784549 Lal16g1254 16 8780468 8784549 ECH