Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1253 ATGGCATTTCTAAGGTCAGTGGCTATTGCTGCATCTGCTATTCCTGCTGCTTTCGCTCTTTCTTCTCTTTCTTCTTCTTCTTCTTCTCAATCTCAATCTCTCAATTTCCCAAACGCGCTCTTCCCCTCTAACCCAAATCGTTTCCCACTCCTTAAATCATTCGCTATCGCTCCCTCACCTCTCCACATGGACCCCAACCCCACTTCTCAGTATGATGCTGCTGGATTTCCAGAGTTACTGACTGAATACATGGTGGATATGAAATGTGAAGGGTGTGTTAATGCGGTTAAAGATAAGTTGCAGACAATCAAGGGAGTGAAGAATGTAGAGGTGGACTTGAGCAATCAGGTAGTTAGGGTTCTTGGTTCAACACCAGTGAAGACCATGACTGAAGCTTTGGAACAGACTGGCAGAAAAGCCCGATTAATCGGACAAGGAGTTCCAGAAGACTTCTTAATATCTGCTGCTGTTTCCGAATTCAAAGGTCCAGATATTTTTGGCGTTGTCCGCCTGGCTCAAGTAAACATGGAACTGGCTAGGATAGAAGCCAACTTCAGTGGGTTGTCACCAGGAAAGCATGCGTGGTCTATTAATGAGTTTGGAGATCTGACTAGAGGTGCATCAAGCACTGGTAAAGTGTTCAGTCCAACAAATGAGAAAGATGCTAAAGAGCCAGTTGGTGACCTGGGAACACTAGATGCCAACGAAAAGGGCGAGGCTTTTTACACTGGGGTCAAAGAAAAACTGAGGGTGGCAGATCTTATTGGACGAGCTGCGGTGGTTTATGCAACTGAAGATAGATCAGAACCCGGTATAGCTGCTGCTGTAATAGCTAGAAGTGCAGGAGTGGGTGAGAACTATAAAAAATTATGTACTTGTGATGGCACCACCATATGGGAGGCAGGTGACAGGGATTTTGTTACTAGCAAGGTCTGA 936 0.4541 MAFLRSVAIAASAIPAAFALSSLSSSSSSQSQSLNFPNALFPSNPNRFPLLKSFAIAPSPLHMDPNPTSQYDAAGFPELLTEYMVDMKCEGCVNAVKDKLQTIKGVKNVEVDLSNQVVRVLGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHAWSINEFGDLTRGASSTGKVFSPTNEKDAKEPVGDLGTLDANEKGEAFYTGVKEKLRVADLIGRAAVVYATEDRSEPGIAAAVIARSAGVGENYKKLCTCDGTTIWEAGDRDFVTSKV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1253 311 Gene3D - 78 148 - -
Lal16g1253 311 SUPERFAMILY Cu,Zn superoxide dismutase-like 144 302 IPR036423 GO:0006801|GO:0046872
Lal16g1253 311 Pfam Heavy-metal-associated domain 83 139 IPR006121 GO:0046872
Lal16g1253 311 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 8 311 IPR024134 -
Lal16g1253 311 CDD HMA 82 141 IPR006121 GO:0046872
Lal16g1253 311 ProSiteProfiles Heavy-metal-associated domain profile. 79 142 IPR006121 GO:0046872
Lal16g1253 311 SUPERFAMILY HMA, heavy metal-associated domain 81 143 IPR036163 GO:0046872
Lal16g1253 311 Gene3D Superoxide dismutase, copper/zinc binding domain 149 279 IPR036423 GO:0006801|GO:0046872
Lal16g1253 311 Pfam Copper/zinc superoxide dismutase (SODC) 167 268 IPR001424 GO:0006801|GO:0046872
Lal16g1253 311 PANTHER COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC 8 311 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1253 K04569 - gmx:547617 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1253 16 8775451 8779266 Lal16g1253 16 8775451 8779266 ECH