Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1245 ATGCAACCCTCTTGTGCTTGTGAATCTTCACAAACCTGCTTCAATGGCTGTTTTTCATCTTTGAATTTCTCTGATGAGTCTCATAATACTTCAAAGTCAACCACCAATGATGCAACTGGAACAAATTTGAACTATTACTTTGTCACAGCCACATGTTCCACTCTTCAACCATATACACAATTCACAAACTTTGAGTCCCTCCCACCTTTTCAAGAATCATACATTAACTTCACCAAAGCATTCTCTCAATTTTCAACAACTTCTCTAGTCGATCAAATTCGAGCCGAAAACTATTCTCACTTGAGTCAGTCCAACGTCTGTTTTGATTACACCGGATATGGCCTTTTCTCTTATGCACAACATCATAGATTTTGTCCCACAAATTCAATTGCTTCATCATCCTCATCATTGCCATACTCTACCAATGAAATACCCTTCTTTGATATTTCCTTTAAGTCAGTGAATTTGCATTCACAGATTCTTTATGGTGGCCATGAATCAGAAATAGAGTCCATAATAAGAGAAAGAATCATGGCATTTATGAATGTCTCTGAAGCTGATTACACTCTAGTTTTCATTGCCAATGAGGTATCTGCTTTTAAGCTTGTTGCTGATTCTTTTCAATTTCAGTCCAATGGGGACCTTCTCACAGTGTATGATCACAACAGTGAGGCTTTGGATATGATGATTTCAAGCTGCAAGAAGCAAGGAGTGCGTATCGATTCGGCCGAGTTCAATTGGCCTAATCTTGGAATAGAGTGGAGAAAGTTAAAGAAGATGATAATGAGTAGAAGGGAAAAGAAAAAAAGAGGCCTATTTGTTTTTCCAATTCATTCAAGAGTTACAGGAACACCATATTCCTATATTTGGATGTCTATGGCACAAGAAAATGGGTGGCATGTATTGCTTGATTTATGTGCTTTGAGACCTAAGGAGATGTATACTTTAGGTATGTCTATGTTTAAGCCTGACTTCATGATTTGTTCATTTTATAAAGTTTTTGGTGAAAACCCATCAGGCTTTTCATGCTTATTTGTCAAGAAATCTAGTGTTTCTTCACTTAAAGATTCAGCCAATGTTACAAGCATTGGAATTATAAGCCTAGTTCCAGCATTTAGTAATGAAAAAAGTGAAGAAATTGTGGAGTTAAGAACAGCCTTTGACTCATCTAGTTCTAGAAAAAGATCAGGCCTAACAAATGAAAGTGTAGGAATTGAATGTAAAGGATTGGATAATGCAGATTCAGTGGGGCTAATAGTAATTACAAGCAGGACCAAGTATTTGACTAATTGGTTGGTTAATGCATTAAAGAGTCTTCAACATCCACACCATGAAAATGGACTTTCTCTAATTAAGATATATGGATCTAAGATAAATCCTCATCGTGGACCCATTGTGGCATTTAATATATTTGATTGGAAAGGTGAAAAGGTTGATCCTTTACTTGTACAAAAGCTAGCTGATAGGAACAATATATCATTAAGTTGTGCATTTTTGCAAAATATAAGGTTCTTAGATAAGAATGAAGAAGAGATACAAAGGGCCTTAGAAAAAAGGGTATATAAGGTTGAAAAATTGGGCTTATCCATGAAGACACATAAGAATGAGTTTGGGATATTTGTGGTCACTGCTGCATTAGGCTTCTTGACAAATTTTGAAGATACTTATAGGCTATGGGCTTTTGTTTCAAGGTTCTTGGATGCAGATTTTGTGGAGAAAGAGAGATGGAGATACATGGCACTTAATCAAAAGACTATTGAAATATGA 1767 0.3594 MQPSCACESSQTCFNGCFSSLNFSDESHNTSKSTTNDATGTNLNYYFVTATCSTLQPYTQFTNFESLPPFQESYINFTKAFSQFSTTSLVDQIRAENYSHLSQSNVCFDYTGYGLFSYAQHHRFCPTNSIASSSSSLPYSTNEIPFFDISFKSVNLHSQILYGGHESEIESIIRERIMAFMNVSEADYTLVFIANEVSAFKLVADSFQFQSNGDLLTVYDHNSEALDMMISSCKKQGVRIDSAEFNWPNLGIEWRKLKKMIMSRREKKKRGLFVFPIHSRVTGTPYSYIWMSMAQENGWHVLLDLCALRPKEMYTLGMSMFKPDFMICSFYKVFGENPSGFSCLFVKKSSVSSLKDSANVTSIGIISLVPAFSNEKSEEIVELRTAFDSSSSRKRSGLTNESVGIECKGLDNADSVGLIVITSRTKYLTNWLVNALKSLQHPHHENGLSLIKIYGSKINPHRGPIVAFNIFDWKGEKVDPLLVQKLADRNNISLSCAFLQNIRFLDKNEEEIQRALEKRVYKVEKLGLSMKTHKNEFGIFVVTAALGFLTNFEDTYRLWAFVSRFLDADFVEKERWRYMALNQKTIEI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1245 588 Gene3D Aspartate Aminotransferase, domain 1 396 574 IPR015422 GO:0003824
Lal16g1245 588 Gene3D - 151 388 IPR015421 GO:0003824
Lal16g1245 588 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 4 588 - -
Lal16g1245 588 SUPERFAMILY PLP-dependent transferases 151 566 IPR015424 -
Lal16g1245 588 PANTHER MOLYBDENUM COFACTOR SULFURASE-LIKE PROTEIN 4 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1245 Lal-Chr16 8682942 8684708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1245 - - gmx:100796219 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1245 16 8682942 8684708 Lal16g1245 16 8682942 8684708 ECH