Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1238 ATGGGTCTTCGTTTTTCTTCTTATTTCAAAGCTAACCCAAATCACTCTCCGATTGTTCCTTCCAAACCTACCTTTGAGGATTTACCTGAGAGTTGTGTTGCACTTATCATGGCTTACATGGATCCTCCTCAGATTTGCAACCTAGCTACGTTGAATCGCACTTTTCGTTGTGCTTCTTGTGCTGATTTCGTTTGGGAATCGAAGCTGCCTTCAAATTATGATCTCATTGTTCGCAAGATTTTTAATGATTTTCCTTGCGATTTGGGTATGAGAGGGATTTATGCAAGGCTTTGCCGGGTCAATAGTTTTGATAGAGGCACCAAGAAAGTTTGGCTGGATAGAAGTTTGGGTAAGATTTGTATGTCAGTATCGGCGAAGGGACTATCAATAACAGGAATTGATGATAGGAGATATTGGAACCATATCCCTTCCGAAGAATCGAGGTTCAGTAGTGTTGCATACCTGCAGCAAACCTGGTGGTTTGAAGTGGATGGGAAAGTTGAGTTCCCATTTCCAGCTGGGACATATAGCTTATACTTCAGAATACATCTCGGGCGAGCCTCAAAGAGATTCGGACGACTTGTCTGCAACACCGAGCATGTCCATGGGTGGGACAGAAAGCCCGTAAGATTCCAGCTACGGACTTCCGATGGACAATATGTCGCATCGCAGTGTTTTCTTAAAGGACCTGGCAATTGGTGCTATTACCATGCAGGCGATTTTGTGGTTGAAGATGGCAATGCATCAACAACAGTCAAATTCTCAATGACCCAAATTGATTGCACACACACTAAAGGTGGTCTTTGCTTAGATTCTGTGCTCATATATCCAAGTGAACTCAAGAAGGTTAAGTCATTTTTAAATTACTCTTAA 873 0.425 MGLRFSSYFKANPNHSPIVPSKPTFEDLPESCVALIMAYMDPPQICNLATLNRTFRCASCADFVWESKLPSNYDLIVRKIFNDFPCDLGMRGIYARLCRVNSFDRGTKKVWLDRSLGKICMSVSAKGLSITGIDDRRYWNHIPSEESRFSSVAYLQQTWWFEVDGKVEFPFPAGTYSLYFRIHLGRASKRFGRLVCNTEHVHGWDRKPVRFQLRTSDGQYVASQCFLKGPGNWCYYHAGDFVVEDGNASTTVKFSMTQIDCTHTKGGLCLDSVLIYPSELKKVKSFLNYS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1238 290 SUPERFAMILY F-box domain 19 99 IPR036047 GO:0005515
Lal16g1238 290 PANTHER F-BOX PROTEIN PP2-A12 1 285 - -
Lal16g1238 290 Pfam Phloem protein 2 118 277 IPR025886 -
Lal16g1238 290 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1238 Lal-Chr16 8635862 8638925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1238 - - gmx:100777716 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1238 16 8635862 8638925 Lal16g1238 16 8635862 8638925 ECH
Lal15g1369 15 15827403 15831026 Lal16g1238 16 8635862 8638925 LSH