Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1222 ATGGCGGAACCTCCACTTTCAGTTCCAGACACTGCATCATCATCATCATCTTCTTCTTCATGCTGGAGCAACGTTGTGAAGAACCAAGCACATCCGAAACCCCCTCAACAACACACTCCTCAACTCTTATTCAACACATGCGATTCCTCCAACGGCATCTCACTCGCCGTCGTCGACGCCAACGCCGTCATTGAATCCGGAGAGAAGCTTCACTCTTTTTCTGACAAGTTCGTCTCTGTGCCTGAAGTCATGGACGAAATTCGTGACCCTGTTTCACGACACAAGCTCTCTTTCCTTCCCTTCACTATCGATACCATGGAGCCCACTCCTGAATCCATTAACAAAGTTGTCAAATTTTCTAGGGCTACTGGTGACCTGCAGACTCTTTCTGATGTTGATATCAAACTCATAGCTCTGACTTATACTTTGGAGGCTCAAATCCATGGGACAAAACATCTCCGGGATATCCCACTTCCTGTGAAAATGTTAAATGTTAGGAGGTTGCCGGAGAAGGAAATGCCGGGCTGGGGCTCTAATGTGCCTAATTTGCAAGAGTGGGAAGCTTTGGAGGAAGCTGAAGACAAAACAAATTCTGACTCAAAAATTCTTCCGTCGCAAGACTTAAACTTGAACATTGTTTCTCGAGATGACCTCTCTGAAGACGGGTCAGTGCATCATAAAAGCGAAACACCTTCAGAAATTCAAGAGGACAGTTCAAGCAAGCCTAAGAAATATGAAGCTAAGAAAAAGGAGATAGACATTGAAGGGAAAATGGTTGCTGATGGAGTTGATGCATCTCAAGGACAAGTTGACGATGATGATGGTGATTGGATGCCAGCTGTCAGTCGTAGTACTCATAGGAGATTTCTGAGAAGGAAAGCTAAACGTGAGTCCAATGAAGCATTATTCAATCAAGATCAACAAGAGTTGGAAGAAAACGTTGATGATAGTGTTGATAAAGATGCTAGAGCTTCAAATCAGCTTGTACACCAAACTGATGAAGAAAAACATACTGAAAAAGCTGTTGATGAGGGTAATATGATAATAGAAGAGAACGAGGGCACAAAAAGTCTCTCTGAAGGTCTGAAGCAAATAAGGCTGGAAGAAGGTTTGCCTGAAAATCTTGATGAAGAGCACACACCAAAAAGTGCTGGACTCCCCGAACCTGCAGCTGATGGCAATGTCACTATAGCAACTAAACCTTGTGAGACTGATACAGTCAATGACCAATCAAATCACTTCGAGACTTCAAGCCAGACCAGCGAAGCTACTGAATTTACATTTGCAGATGATGATAGCGAGCAAAGTTGGGGGCTTAGATCTTTGTCTGAATCAAGTGTAGCCTGTGTAACTGCTGACTTTGCAATGCAAAATGTTCTTCTCCAAATGGGCTTGCGCTTGCTGGCACCTGGAGGAACACAGATACACCAGCTCCACAGATGGATACTCAAGTGTCATGCCTGCTTCACTGTCACTGCTGAAATTGGGAGGATTTTCTGTCCAAAATGTGGAAATGGTGGCACCTTACGGAAGGTAGCTGTTACTGTTGGTGAAAATGGTATAGTACTAGCAGCTCGTCGACCACGGGTTACCTTACGTGGCACAAAGTTTTCTTTGCCTTTACCCAAAGGTGGAAGAGACTCGATCACAAAGAACCTCATTCTCCGTGAAGATCAACTTCCTCAAAGGATACTATATCCTAAAACAAAGAAGAAAGGCAACAAGCGGGATGATGACTTCTTTACAGCAGATAGTGTCTTCAGCGCCCACCACACCGATAAGAAAGCTTCTTTTCAGCAGCCTTCCATAGGGAAAGCATTGTCAGTTTTCCGTGGGAGGAGAAATCCGAACGACAATCACTACTCGCGCTCTAAGCATAATAAGTAA 1887 0.442 MAEPPLSVPDTASSSSSSSSCWSNVVKNQAHPKPPQQHTPQLLFNTCDSSNGISLAVVDANAVIESGEKLHSFSDKFVSVPEVMDEIRDPVSRHKLSFLPFTIDTMEPTPESINKVVKFSRATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDIPLPVKMLNVRRLPEKEMPGWGSNVPNLQEWEALEEAEDKTNSDSKILPSQDLNLNIVSRDDLSEDGSVHHKSETPSEIQEDSSSKPKKYEAKKKEIDIEGKMVADGVDASQGQVDDDDGDWMPAVSRSTHRRFLRRKAKRESNEALFNQDQQELEENVDDSVDKDARASNQLVHQTDEEKHTEKAVDEGNMIIEENEGTKSLSEGLKQIRLEEGLPENLDEEHTPKSAGLPEPAADGNVTIATKPCETDTVNDQSNHFETSSQTSEATEFTFADDDSEQSWGLRSLSESSVACVTADFAMQNVLLQMGLRLLAPGGTQIHQLHRWILKCHACFTVTAEIGRIFCPKCGNGGTLRKVAVTVGENGIVLAARRPRVTLRGTKFSLPLPKGGRDSITKNLILREDQLPQRILYPKTKKKGNKRDDDFFTADSVFSAHHTDKKASFQQPSIGKALSVFRGRRNPNDNHYSRSKHNK 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1222 628 MobiDBLite consensus disorder prediction 1 40 - -
Lal16g1222 628 CDD PIN_Nob1-like 57 168 IPR033411 -
Lal16g1222 628 Gene3D - 49 164 - -
Lal16g1222 628 SUPERFAMILY NOB1 zinc finger-like 475 538 IPR036283 -
Lal16g1222 628 PANTHER - 20 626 - -
Lal16g1222 628 MobiDBLite consensus disorder prediction 219 258 - -
Lal16g1222 628 PIRSF Nob1 36 628 IPR017117 GO:0000469|GO:0004521|GO:0042274
Lal16g1222 628 MobiDBLite consensus disorder prediction 219 280 - -
Lal16g1222 628 MobiDBLite consensus disorder prediction 295 425 - -
Lal16g1222 628 MobiDBLite consensus disorder prediction 362 383 - -
Lal16g1222 628 Gene3D - 469 543 IPR036283 -
Lal16g1222 628 MobiDBLite consensus disorder prediction 8 40 - -
Lal16g1222 628 MobiDBLite consensus disorder prediction 591 628 - -
Lal16g1222 628 MobiDBLite consensus disorder prediction 316 350 - -
Lal16g1222 628 MobiDBLite consensus disorder prediction 399 425 - -
Lal16g1222 628 Pfam Nin one binding (NOB1) Zn-ribbon like 475 545 IPR014881 -
Lal16g1222 628 Pfam PIN domain of ribonuclease 57 143 IPR033411 -
Lal16g1222 628 PANTHER RNA-BINDING PROTEIN NOB1 20 626 IPR039907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1222 K11883 - gmx:100785714 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1222 16 8503524 8507126 Lal16g1222 16 8503524 8507126 ECH