Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1218 ATGATTTGTACATCAACAAATCGCATCTTGTTCACATTCATAAAAACTACTACAAGGGTAGCTTCTCCTCTTTCTTCTTCTCTTCATTCCTTCTCTAATATTCCTAACCAAGATCAAATTTCACTGTTTAATCTTCCCATTAAACCAAAACTGGGTCTTTCAATTTCAAAACCAAAAACTTTCTGTTCGAGAAAAGATCACACTATGGCTACCCCATCAAACGCCAATTCAATCCATGACTTCACTGTTAAAGATGCTAGGGGAAAGGATGTTAATCTTGGTGACTACAAAGGAAAGGTCCTTCTTATTGTCAATGTTGCCTCACAATGTGGCTTGACTAATTCCAATTACACAGAGCTGAATCAGTTGTATGAAAAATACAAAGGCAAAGGTCTTGAAATTCTGGCATTCCCATGTAACCAGTTTGGAGAACAGGAGCCTGGATCGAACGAGCAGATAGTAGAGTTTGCTTGTACTCGCTTCAAAGCCGAGTTTCCCATTTTTGACAAGGTGAATGTGAATGGTGACAATGCTGCTCCAATCTATAAGTTTCTAAAATCAAGCAAAGGTGGACTCTTTGGAGATAACATCAAATGGAACTTCTCCAAGTTCCTTGTTGATAAAAATGGGAATGCTGTTGAACGTTATGCACCAACAACTTCTCCTCTAAGCATTGAGAAGGACTTACAAAAGCTGTTGGATGCATGA 708 0.3856 MICTSTNRILFTFIKTTTRVASPLSSSLHSFSNIPNQDQISLFNLPIKPKLGLSISKPKTFCSRKDHTMATPSNANSIHDFTVKDARGKDVNLGDYKGKVLLIVNVASQCGLTNSNYTELNQLYEKYKGKGLEILAFPCNQFGEQEPGSNEQIVEFACTRFKAEFPIFDKVNVNGDNAAPIYKFLKSSKGGLFGDNIKWNFSKFLVDKNGNAVERYAPTTSPLSIEKDLQKLLDA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1218 235 CDD GSH_Peroxidase 77 229 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 PRINTS Glutathione peroxidase family signature 96 113 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 PRINTS Glutathione peroxidase family signature 132 148 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 PRINTS Glutathione peroxidase family signature 197 206 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 ProSitePatterns Glutathione peroxidases signature 2. 135 142 IPR029760 -
Lal16g1218 235 ProSitePatterns Glutathione peroxidases active site. 98 113 IPR029759 -
Lal16g1218 235 SUPERFAMILY Thioredoxin-like 77 234 IPR036249 -
Lal16g1218 235 Pfam Glutathione peroxidase 78 186 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 Gene3D Glutaredoxin 69 235 - -
Lal16g1218 235 PANTHER GLUTATHIONE PEROXIDASE 10 235 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 ProSiteProfiles Glutathione peroxidase profile. 68 235 IPR000889 GO:0004602|GO:0006979
Lal16g1218 235 ProSiteProfiles Thioredoxin domain profile. 72 235 IPR013766 -
Lal16g1218 235 PANTHER GLUTATHIONE PEROXIDASE 10 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1218 Lal-Chr16 8480208 8483651 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1218 K00432 - gmx:100306295 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1218 16 8480208 8483651 Lal16g1218 16 8480208 8483651 ECH