Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1206 ATGATAGGAAGAAGAGTTATTGGAGAACATGGCAGAGGTGTTAACAACACTATGGATACTATAAACGCTGCTGCTTTTGTCATAGAATCTTCTCAGGATCGTGTTTCTCAACCCACTCTCCAGAAGAAAAAATGGGGAAACTGGTTAAACATATCTGGTTGTTTTGGATATCACAAAAACCGAAAGCGAATTGGTCATGCTATCCTTGTACCAGAACCTACACCTCCTGGATCAGATTCTGCTGCTGCTGTTAGTTCAACCCAAGCACCTATTATAACCCTCCCATTTGTAGCACCACCTTCATCTCCGGCATCACTCTTTCAATCAGAACCTCCTTCGGTTGCACAATCGCCAGTTGGTATACTATCTCTAACTTCTGTATCTGCCAGCATGTACTCTCCGAGTGGCCCTGCCTCGATTTTTGCCATTGGCCCTTACGCACACGAAACACAACTTGTTTCACCACCAGTTTTCTCAGCATTCACCACCGAACCATCAACCGCTCCTTTCACTCCGCCTCCTGAGTCTGTCCACTTGACTACACCTTCGTCTCCTGAAGTCCCATTTGCTCAGCTACTTGACCCTAACAATAAGCACGGTGACACGTTTCAGAGGTTCCAAATATCTCACTATGATTTCCAGGCTTATCAGTTTCACCCGGGAAGCCCACTTGGTCAACTTATATCACCAAGATCTTGCATTTCAGCTTCTGGCACCTCCTCTCCTTTACCCGATTGTGAATTTACCACGGTTGACACTACGAAGCTTCTTAACTTAGACAAACTGTCTGCTTATCAAAACCCGAAGTCAAATCAAGGTTCCGGGTCTATAACCCCGGATGCTTTAAGGTCTACAACTCAAGCTGGTTTTCATCAAAATCACTGGGTTTCTGAGATGAAAATGTCACCACATGCACGCAATAATCACCCGAATGAGATTAGTATAAATCATGGGGTCTCATTTGAACTATCTGCACAAAAAGTATTGAGATTTGTGGATAACAAACCAGCATCATCGTCATGGACTAACGCCTTGTCAAAATTAAAGAATGGTGCAACAACACTAGGCAGAGAAGAAAATTCAAGAGAAACTGGTTGTTCTGACAAACAACTTCTCACCGAAACTCCGAACGATACAACCCAGCAAACCACTTCGGGTGGAGATGAGGCAACAGTTCATGAAAAATTAACCCTTTCTTCTTCTAAAGAATTCAATTTTGATAATGCAGATGGGGTAGACTCTCGTCATGGTCCCGGTATAGTTACCGAGTGGTGGGCTAATGAGAAAGTTGCAGGGAAAGAGAGAGAGGCCTCCAACAATTGGTCTTTCTTCTCAATGATTCAACCTGGTATCAGCTAA 1359 0.4378 MIGRRVIGEHGRGVNNTMDTINAAAFVIESSQDRVSQPTLQKKKWGNWLNISGCFGYHKNRKRIGHAILVPEPTPPGSDSAAAVSSTQAPIITLPFVAPPSSPASLFQSEPPSVAQSPVGILSLTSVSASMYSPSGPASIFAIGPYAHETQLVSPPVFSAFTTEPSTAPFTPPPESVHLTTPSSPEVPFAQLLDPNNKHGDTFQRFQISHYDFQAYQFHPGSPLGQLISPRSCISASGTSSPLPDCEFTTVDTTKLLNLDKLSAYQNPKSNQGSGSITPDALRSTTQAGFHQNHWVSEMKMSPHARNNHPNEISINHGVSFELSAQKVLRFVDNKPASSSWTNALSKLKNGATTLGREENSRETGCSDKQLLTETPNDTTQQTTSGGDEATVHEKLTLSSSKEFNFDNADGVDSRHGPGIVTEWWANEKVAGKEREASNNWSFFSMIQPGIS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1206 452 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 11 452 - -
Lal16g1206 452 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 11 452 IPR040420 -
Lal16g1206 452 MobiDBLite consensus disorder prediction 352 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1206 Lal-Chr16 8379582 8382574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1206 - - gmx:100791666 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1206 16 8379582 8382574 Lal16g1206 16 8379582 8382574 ECH