Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1205 ATGGAGGCACCAAAAGAAATATTCTTAAAAGATTATAAATTTCCTGATTACTACTTTGACACCGTGCATCTGAAATTTTCTTTGGGAGATGAGAAGACAATAGTTAGTTCTAAAATTATTGTGTTCCCTCATACTGAAGGTTTTTCTCCCCCATTGGTTCTAGATGGACAAGACTTATCTTTAGTTTCAATTCAGATTAATGGCAAGGCTTTGAAGGAGGAAGATTACCATTTGGATGCACGCCATCTAACAATTCAATCACCTCCCAATGGTAAATATTATCTTGAAATTATTACTGAGATCCAACCACAGAAAAACACATCATTGGAGGGGCTTTACAAGTCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAGAATTACATTTTTTCAGGATCGACCTGATATAATGGCAAAATATACGGTTCGCATTGAGGCTGATAAGTCACTCTATCCAGTGTTATTGTCTAATGGAAACCTGGTTGAACAAGGTGATTTGCAGGATGGCAAGCATTATGCTGTTTGGGAGGACCCATTCAAGAAACCTTCCTATTTGTTTGCCTTGGTTGCTGGGAAATTTCAAAGTAGCGATGACACATTTGTTACCCGTTCAGGGCGGAAGGTGTCCCTCAGGATCTGGACCTCTGCAGATGACCTACCTAAGACTGCACATGCTATGTATTCTTTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAGTATGACCTGGATCTCTTCAATATTGTTGCTATCCCAGATTTTAACTCGGGAGCCATGGAAAACAAGAGCTTGAATATCTTCAATTCCGAGCTTGTATTGGCTTCTCCAGAAACTGCTACTGATGCAGATTACGCTGCAATATTTGGATGTATTGGCCATGAGGAATTCTCATCTGATATGGGAAGTCGTACTGTTCAAAGGATTACTGAAGTTTCAGCACTTAGAAATTACCAATTTCCACAGGATGCAGGTCCCATGGCCCACCCAGTGCGACCACACTCTTACATTAAGATGGACAACTTCTTCACAGGCATGTCTCTTTGTTTTCAGAACTTTGGTCGTGTCGAGATTGGGGCTGAAGTTGTCAGACTGTATAAAACCTTACTGGGGAGTGAAGGGTTCCGAAAAGGCATGGATCTTTATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTATGCCGCCATGCGAGATGCAAATGATGCAGATTTTGCGAATTTCTTTCTCTGGTACTCTCAAGCTGGGACCCCTATTGTCAAAGTACAAACTTCTTATAATCCAGAAGCACATACTTTTTCTTTGAAGTTTAGTCAGGAGATACCACCAACTCCAGGGCAATCAGTTAAGGAACCCATGTTCATTCCTGTTGCAGTAGGTTTGCTTGATTCAACTGGCAAGGATATTTCCCTTTCAGGTTTTTATCATGATGGGACTCTTGAGTCTGTTTCATACAAGGATCAGTCAGTCATCACTACTGTCCTTAGAGTCACCAAGGTCTATGATATGAGATCACAAATTCTGCTTGCACCCTTCTTCCTCGAAGTCCTTCTTTACTCTGAATTTGTTGGCCAATTCTTTGTAGGGGTCTCAGTTGTTGAGATAAAGAAGAAGAATTTGTGTTCACTGATATTTGAAAGACCTGTTCCCTCTCTGTTGAGAGGATACAGTGCTCCTATCCGACTTGAATCTGATCTCACTGATGGTGACCTGTTCTTATTAGCTAATGATTCTGATGAGTTCAACCGTTGGGAAGCTGGGCAAATTTTGGCACGTAAGCTGATGCTCAATTTAGTTGATGATTTTCAACATGACAAACCACTGGTTCTGAATCCCAATTTTGTGGATGGGTTCAAACGTATACTAAGTAACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCTGGTGATGGAGAAATAATGGACCTGATGGAAGTTGCAGATCCTGATGCTGTTCATGCTGTTCAAACTTTCATAAGGAAGCAGCTTGCAAGTGAACTGAGAGCACAGTTCCTTGACATAGTAAAAAATAATAGGAGCTCAGAAGAATATGTGTTCAATCATCAAAACTTGGCCAGACGTGCTCTGAAGAATGTTGCTATTGCCTATCTTGCATCCCTTGAGGATCAAGAGTTCACCAATCTTGCACTAGATGAGTATAAAGCTGCTACAAATTTGACTGAGCAGTTTGCAGCTTTAGCTGCCATATCCTGGAACCCTGGTAAAGCTCGTGGTGATGTTCTTGCTGACTTTTATGGCAAGTGGCAGGATCACTTACCGATGGTGAACAAATGGTTGTCTCTCCAAGCAGTATCTGACATTCCTGGCAATCTTGAAAATGTGCGGCAACTGCTAAACCACCCGGCATTTGACCTGCACACTCCTAACAAATTGTACTCTCTCATCGGAGGCTTCTGTGGGTCACCGGTGAACTTTCATGCGAAGGACGGGTCAGGCTATCAGTTTTTGGGAGAAATGGTGTTGCAACTTGACAAAATTAATCCGCAGGTTGCCTCAGGGATAGTATCATTCTTCTCTAGATGGAAGCTTTATGATGAAAACAGACAAAAACTTATGAAGGCCCAGCTGGAGAAAATCTTGTCTAGCAATGGATTATCAGAGAATGTGTTTGAGATTGTTTCAAAAAGGTTAGCTGCTTAA 2700 0.4148 MEAPKEIFLKDYKFPDYYFDTVHLKFSLGDEKTIVSSKIIVFPHTEGFSPPLVLDGQDLSLVSIQINGKALKEEDYHLDARHLTIQSPPNGKYYLEIITEIQPQKNTSLEGLYKSSGNFCTQCEAEGFRRITFFQDRPDIMAKYTVRIEADKSLYPVLLSNGNLVEQGDLQDGKHYAVWEDPFKKPSYLFALVAGKFQSSDDTFVTRSGRKVSLRIWTSADDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAIPDFNSGAMENKSLNIFNSELVLASPETATDADYAAIFGCIGHEEFSSDMGSRTVQRITEVSALRNYQFPQDAGPMAHPVRPHSYIKMDNFFTGMSLCFQNFGRVEIGAEVVRLYKTLLGSEGFRKGMDLYFKRHDGQAVTCEDFYAAMRDANDADFANFFLWYSQAGTPIVKVQTSYNPEAHTFSLKFSQEIPPTPGQSVKEPMFIPVAVGLLDSTGKDISLSGFYHDGTLESVSYKDQSVITTVLRVTKVYDMRSQILLAPFFLEVLLYSEFVGQFFVGVSVVEIKKKNLCSLIFERPVPSLLRGYSAPIRLESDLTDGDLFLLANDSDEFNRWEAGQILARKLMLNLVDDFQHDKPLVLNPNFVDGFKRILSNSSLDKEFVAKAITLPGDGEIMDLMEVADPDAVHAVQTFIRKQLASELRAQFLDIVKNNRSSEEYVFNHQNLARRALKNVAIAYLASLEDQEFTNLALDEYKAATNLTEQFAALAAISWNPGKARGDVLADFYGKWQDHLPMVNKWLSLQAVSDIPGNLENVRQLLNHPAFDLHTPNKLYSLIGGFCGSPVNFHAKDGSGYQFLGEMVLQLDKINPQVASGIVSFFSRWKLYDENRQKLMKAQLEKILSSNGLSENVFEIVSKRLAA 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1205 899 Gene3D tricorn interacting facor f3 domain 14 197 IPR042097 -
Lal16g1205 899 Gene3D Neutral Protease Domain 2 286 424 IPR027268 -
Lal16g1205 899 Gene3D - 198 282 - -
Lal16g1205 899 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 207 431 - -
Lal16g1205 899 Gene3D - 576 898 IPR037144 -
Lal16g1205 899 PANTHER - 1 303 IPR012779 GO:0008270
Lal16g1205 899 PANTHER - 302 508 IPR012779 GO:0008270
Lal16g1205 899 PANTHER - 548 899 IPR012779 GO:0008270
Lal16g1205 899 Pfam Peptidase family M1 domain 363 418 IPR014782 GO:0008237|GO:0008270
Lal16g1205 899 Pfam Peptidase family M1 domain 231 303 IPR014782 GO:0008237|GO:0008270
Lal16g1205 899 PANTHER BNAC06G01820D PROTEIN 548 899 - -
Lal16g1205 899 PANTHER BNAC06G01820D PROTEIN 1 303 - -
Lal16g1205 899 PANTHER BNAC06G01820D PROTEIN 302 508 - -
Lal16g1205 899 Pfam Peptidase M1 N-terminal domain 23 189 IPR045357 -
Lal16g1205 899 Pfam Domain of unknown function (DUF3458) Ig-like fold 425 573 IPR035414 -
Lal16g1205 899 CDD M1_APN 11 422 - -
Lal16g1205 899 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 6 195 IPR042097 -
Lal16g1205 899 Pfam Domain of unknown function (DUF3458_C) ARM repeats 580 897 IPR024601 -
Lal16g1205 899 Gene3D - 425 574 IPR038438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1205 Lal-Chr16 8357651 8366276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1205 K01256 - gmx:100803548 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1205 16 8357651 8366276 Lal16g1205 16 8357651 8366276 ECH