Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1190 ATGCTTTCTTCAGGTTTATTCAACTCATCCAAATATTTCATTGTTTCCTTTCATCAATTCACTGTTGTCATTTTCCATAACAAAATTTATGTTTTATGTGTTTCGTGCGAAACAGTTTTCAAATTCTCAATGACAGCAATATCCAACTCGTTATCACTGAAGCATAGTCTTTCTCTTAGATTTCCTCAAACTACGCATTCGCTTCGTTATCGCAATTCTTCAACTTCCCTCAACTTACAGAAAAGATGTTACGCTGCTTTCGCCAACGAGAATCGCGAGTATGTGATTGTTGGCGGTGGAAATGCGGCGGGTTACGCTGCTCGAACTTTCGTGGAGCACGGCTTGGCCGATGGTCGCCTTTGCATTGTCACCAAAGAGGCATATGCACCTTATGAGCGTCCAGCTCTCACAAAAGCATATTTGTTCCCGCATGATAAGAAACCAGCGCGCCTTCCTGGGTTTCACACTTGTGTTGGATCCGGTGGGGAAAGGCAGACTCCGGAATGGTATCAAGAGAAAGGGATAGAGATGTTGTATGAAGATCCCGTGAAAAATATTGATATTGAAAAGCAAACTTTGACAACAAATTCTGGAAAACTTCTTAAGTATGGTTCACTTATTATTGCCACAGGATGTACAGCCTCGAGGTTTCCAGAGAAAATTGGGGGAAACCTATCCGGTGTTCACTATATCCGGGATGTTGCAGATGCAGATGCACTGATTTCATCGTTGGAAAAAGCGAAGAAGGTTGTAGTTGTTGGAGGTGGATATATAGGAATGGAGATCGCTGCCGCAGCTGTTGCTTGGAAACTTGATACAACAATCATATTTCCAGAGGATCGTCTTTTGCAAAGACTGTTCACTCCATCTCTTGCCAGGAGATATGAAGAACTCTACCAAAAGAATGGTGTCAAAATTTTGAAGGGTATCTCCATAAAAAATTTGGAAGCTGGTTCTAGCGGACATGTAGCTGCTGTGAAACTTGGAGATGGATCTATTGTAGAAGCAGATACAGTAATTGTTGGCATTGGAGCAAAACCTTCTGTGAGTCCCTTTGAGAGGGTGGGCCTGAATACAGATGTCGGTGGTATACAGGTTGATGGTCAATTCCGGACTAGTATTCCTGGAATCTTTGCTGTTGGTGATGTAGCAGCTTTCCCTTTAAAGATCTATAACCGTACTGCTCGAGTGGAACATGTAGATCATGCTCGTCGCTCAGCGCAACACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACTTATGATTATCTTCCTTACTTCTACTCAAGGGTGTTCGAATATGAAGGGAGCCCTAGAAAAGTATGGTGGCAGTTCTTTGGAGACAATGTTGGAGATACAGTTGAAATTGGAAATTTTGATCCTAAATTAGCTACCTTTTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTCCTTGAAAGTGGGACCCCTGAGGAATTTCAGCTCCTGCCTAAACTTGCCCGTAATCAGCCTACTATTGATAAAGCCAAACTTCAAAGCGCAAGTTCAGTGGAGGAGGCCCTAGACATTGCTCAGGCATCCTTGTAA 1569 0.4283 MLSSGLFNSSKYFIVSFHQFTVVIFHNKIYVLCVSCETVFKFSMTAISNSLSLKHSLSLRFPQTTHSLRYRNSSTSLNLQKRCYAAFANENREYVIVGGGNAAGYAARTFVEHGLADGRLCIVTKEAYAPYERPALTKAYLFPHDKKPARLPGFHTCVGSGGERQTPEWYQEKGIEMLYEDPVKNIDIEKQTLTTNSGKLLKYGSLIIATGCTASRFPEKIGGNLSGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEIAAAAVAWKLDTTIIFPEDRLLQRLFTPSLARRYEELYQKNGVKILKGISIKNLEAGSSGHVAAVKLGDGSIVEADTVIVGIGAKPSVSPFERVGLNTDVGGIQVDGQFRTSIPGIFAVGDVAAFPLKIYNRTARVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGDTVEIGNFDPKLATFWIESGKLKGVLLESGTPEEFQLLPKLARNQPTIDKAKLQSASSVEEALDIAQASL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1190 522 PANTHER APOPTOSIS-INDUCING FACTOR 1 58 522 - -
Lal16g1190 522 Gene3D - 427 513 IPR016156 GO:0016491|GO:0050660
Lal16g1190 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 93 115 - -
Lal16g1190 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 249 274 - -
Lal16g1190 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 337 351 - -
Lal16g1190 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 377 384 - -
Lal16g1190 522 SUPERFAMILY FAD/NAD(P)-binding domain 89 414 IPR036188 -
Lal16g1190 522 Pfam Pyridine nucleotide-disulphide oxidoreductase 93 407 IPR023753 GO:0016491
Lal16g1190 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 114 - -
Lal16g1190 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 203 221 - -
Lal16g1190 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 249 267 - -
Lal16g1190 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 336 352 - -
Lal16g1190 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 362 384 - -
Lal16g1190 522 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 58 522 - -
Lal16g1190 522 Gene3D - 217 344 IPR036188 -
Lal16g1190 522 Gene3D - 95 410 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1190 Lal-Chr16 8190659 8195625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1190 200 426 Acyl Lipid Metabolism Gene Families AT1G48030 25.417 5.40e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1190 K08232 - gmx:100819919 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1190 16 8190659 8195625 Lal16g1190 16 8190659 8195625 ECH