Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1182 ATGTCTTGTAGTAGTTTGAAATCTCTTTCAAGAGCAGTGTACGAGGAACAACAAGAGAATGTACATAAGAATGTTGAAGAGATAAACAAGTACCTTAAAACAAAGGGAAATTTGTGGAACACATCTCAGTCACTAACAGTTTGGAGAAAATCACTTGTATTTAGTTGTAAAGGATTCACAGTGATAGATTCATGTGGGAATCTAGTGTATCGTGTTGACAATTATACTCTGCACCCAAATGAAGTTATTCTCATGGATGCTTCTGGAAACTCTCTCTTCACCATGCGTCGCCGTACGAAATTTGGATTAATAGAAAGCTGGTATGTGTATGAAGGGGAAATGGAAAACCAATGTAAGAGAAGGAGTAACATAGATAAGTCAAGAAAGATTCCAATTTGTTGTGTAAAGAAGAGTGTAAATATTTTAACCAACAATCCCAAGGTTCAGGCATGTGTATACCATGTAACCTCAGATTCATATAAAAGACATGCAATGTTTACAATTGAAGGTTCCTATGAACATAGGACATGTAAAGTGTTGGATGAGTCCAAGAGAGTTGTTGTTGAAATCAAGAGGAAGGAGGCTAATAGCAAAAATGTCTCTTTTGGGATAGAGATTTTTCAGTTAATTGTTCACCCTGGATTTGATCCTGATTTTGCTATGGCAATTGTTTTATTACTTGATCAAATGTTTTCATAA 699 0.3534 MSCSSLKSLSRAVYEEQQENVHKNVEEINKYLKTKGNLWNTSQSLTVWRKSLVFSCKGFTVIDSCGNLVYRVDNYTLHPNEVILMDASGNSLFTMRRRTKFGLIESWYVYEGEMENQCKRRSNIDKSRKIPICCVKKSVNILTNNPKVQACVYHVTSDSYKRHAMFTIEGSYEHRTCKVLDESKRVVVEIKRKEANSKNVSFGIEIFQLIVHPGFDPDFAMAIVLLLDQMFS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1182 232 Gene3D - 38 232 IPR038595 -
Lal16g1182 232 Pfam LURP-one-related 41 225 IPR007612 -
Lal16g1182 232 PANTHER PROTEIN LURP-ONE-RELATED 17 15 231 - -
Lal16g1182 232 PANTHER - 15 231 IPR007612 -
Lal16g1182 232 SUPERFAMILY Tubby C-terminal domain-like 41 231 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1182 Lal-Chr16 8122298 8124402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1182 - - gmx:100796827 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1182 16 8122298 8124402 Lal16g1182 16 8122298 8124402 ECH
Lal23g1544 23 15548189 15549774 Lal16g1182 16 8122298 8124402 PCT