Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1181 ATGAATGCTGTTCCGAAACATGAGCGGCGGTGGGCGTCGGACACTGTTCCCGGAAAAGTAACGGTTAGCACTGAAACTTCGCCGGGAGCTGAGTCCTATTCCACGGCGGAGGAGTTTGTGGAGGTGACACTCGATCTTCAAGACGACGACACTATTGTTCTTCGTAGCGTTGAACCAGCCTCCGTCGTTGACATCGCCGACGACGCTCTCGCCGGGAGTAGCGGTTACAATACTCCGGCGTCGGTTCCGAGTACACCTTCGATCCGGAGGACCTCATCCCGAGGTTTCCGGCATTTCTCGCAGGAGCTGAAGGCGGAGGCGGTTGCCAAGGCCAGGCACTTCTCGCAGGAACTCAAGGCGGAGCTACGGCGGTTCTCGTGGAGCCATGGCAACACATCACGTGCTCATTCAACTTCTTCCACCGGAGGTGGTGGTGGTGGCGCAGGAGCCGGCTTTGAGACGGCGTTGGCGGCCAGAGCTCTGAGGAAGCAACGTGCTCAGCTAGATCGAACTCGCGCCGGTGCTGTGAAAGCGCTTCGTGGTCTCAGATTCATCAGTAAGAAATCCAACGGCGTTGATGCGTGGAACGAAGTTCGAAGCAACTTCGATAAGCTTTCTAAAGACGGTTATCTCTATCGCGCTGATTTCGCTCAATGCATAGGGATGAGAGATTCTGCAGAATTCGCTCTGGAATTATTCGATTCTCTGAGTCGTAAACGAAGAATGAGAATTGACAAGATCAACAGGGATGAACTTTTCGAATTCTGGTCACAAATCACCGATCAAAGTTTTGATTCACGGCTACAGATCTTCTTCGACATGGTGGACAAGAATGAAGATGGGAGAATAATTGAAGAAGAAGTGAAAGAGATTATCATGTTAAGCGCTTCAGCAAATAAATTATCCAGGCTGAAGGAGCAGGCCGAAGAATATGCAGCTCTGATCATGGAAGAGTTAGACCCGGAAAGACTTGGTTACATTGAGCTATGGCAATTGGAGACACTTTTATTACAAAAGGACACGTACCTCAACTACAGCCAAGCTCTAAGCTACACAAGCCAAGCTTTGAGCCAGAACCTACAAGGACTAAGAATGAAAAGCCCAATACGTAGGATGAGCTTCAGATTACTCTACTATTTGCAAGAGAATTGGAAGAGACTTTTGGTTTTAACATTGTGGGTTGGAATAATGATCGGGTTGTTCGCGTGGAAGTTCATTCAGTACAGGAATAAAGATGTTTTCCAGATAATGGGTTACTGTCTTCTCACAGCTAAAGGTGCAGCTGAGACTCTTAAATTCAACATGGCACTTATACTCTTCCCCGTGTGCAGAAACACCATAACTAAGCTCAGGTCTACTAAGCTGTCTTACATTGTACCCTTTGATGACAACATTAACTTTCATAAGACAATTGCTGCGGCCATCGTGATTGGTATTATACTTCATGTCGGAGATCACCTTGCTTGTGATTTTCCAAGACTTGTGCATTCGTCTGAACTAGTTTATGAGAGGTATTTGAAGGGCGTATTTGGTGATCATAGACCCAGTTATATAGACCTAGTTAAAGGAGTAGAGGGTGTGACTGGAATTCTGATGATGATTTTGATGGCAATAGCATTTACACTAGCAACCAAATGGCTCAGGAGAAATATCATTAAGCTACCTAAACCATTTAGTAGGCTCACTGGTTTCAATGCCTTCTGGTATTCACACCATCTGTTTATCATTGTCTATATCCTGCTCGTTGTCCACGGTGTAAAGCTTTACCTCGTGCACAAATGGTACCTTCAAACGACATGGATGTATCTTGCGGTTCCAGTTTTGCTTTATGTAGCAGAAAGAACGCTCAGATTCTTTCGTTCTGGTTTCTATACAGTCCATCTCATAAAGGTTGCCATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGTTACAAGAGTGGACAATACATGTTTGTACAATGTCCTGCTGTTTCTCCGTTTGAATGGCATCCGTTTTCTATCACCTCAGCCCCAGATGATGATTACCTGAGTGTTCATATTCGGCAACTGGGTGATTGGACACGAGAGCTTAAAAGGGTATTCTCTGAGGCATGTGAGCTTCCTGTAGCTGGGAGGAGTGGACTTCTCAGGGCTGATGAAACGACTAAGAAAAGTTTGCCCAAGTTGAAGATAGATGGTCCTTACGGTGCACCTGCACAGGATTATAGGAAATATGATGTTTTGTTACTTGTTGGTCTGGGAATTGGAGCAACACCTTTCATTAGCATTTTGAAAGATCTTCTCAACAACATTATCAAAATGGAGGAGCAGGCGGACTCAACCTCGGATATGAGTAGAGGTTCAGACCTCAGTATTGGGAGCACAGATTCACCTTCTCTTAATAAGATTGCTCCAAGACGGAAGAAAACACTGAAGACAACAAACGCTTATTTCTATTGGGTTACAAGAGAGCAAGGTTCTTTTGATTGGTTTAAAGGAGTCATGAATGAAGTAGCTGAGCTTGACCAAAGGGGTGTTATTGAGATGCACAACTACTTGACTAGTGTATATGAAGAAGGCGATGCTAGATCTGCTCTCATCACCATGGTGCAAGCACTCAACCATGCCAAAAATGGACTTGACATTGTTTCTGGGACTAGGGTGCGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTTTCCAAAATGTGTTCCAAGCATTGTAATGGGAGAATAGGGGTATTTTACTGTGGTGCACCAGTTTTGGCTAAAGAACTTAGCAAGCTATGCTTCGAGTTCAATGAAAAAGGTCCCACAAAATTTGATTTCCACAAGGAGCATTTCTAA 2850 0.4488 MNAVPKHERRWASDTVPGKVTVSTETSPGAESYSTAEEFVEVTLDLQDDDTIVLRSVEPASVVDIADDALAGSSGYNTPASVPSTPSIRRTSSRGFRHFSQELKAEAVAKARHFSQELKAELRRFSWSHGNTSRAHSTSSTGGGGGGAGAGFETALAARALRKQRAQLDRTRAGAVKALRGLRFISKKSNGVDAWNEVRSNFDKLSKDGYLYRADFAQCIGMRDSAEFALELFDSLSRKRRMRIDKINRDELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRIIEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRMKSPIRRMSFRLLYYLQENWKRLLVLTLWVGIMIGLFAWKFIQYRNKDVFQIMGYCLLTAKGAAETLKFNMALILFPVCRNTITKLRSTKLSYIVPFDDNINFHKTIAAAIVIGIILHVGDHLACDFPRLVHSSELVYERYLKGVFGDHRPSYIDLVKGVEGVTGILMMILMAIAFTLATKWLRRNIIKLPKPFSRLTGFNAFWYSHHLFIIVYILLVVHGVKLYLVHKWYLQTTWMYLAVPVLLYVAERTLRFFRSGFYTVHLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPDDDYLSVHIRQLGDWTRELKRVFSEACELPVAGRSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEQADSTSDMSRGSDLSIGSTDSPSLNKIAPRRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGLDIVSGTRVRTHFARPNWKKVFSKMCSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGPTKFDFHKEHF 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1181 949 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 621 741 IPR017927 GO:0016491
Lal16g1181 949 Gene3D - 168 284 - -
Lal16g1181 949 SUPERFAMILY Riboflavin synthase domain-like 624 736 IPR017938 -
Lal16g1181 949 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 743 949 IPR039261 -
Lal16g1181 949 SFLD NADPH oxidase subgroup (NOX) 110 949 - -
Lal16g1181 949 MobiDBLite consensus disorder prediction 778 801 - -
Lal16g1181 949 Coils Coil 764 784 - -
Lal16g1181 949 Gene3D - 736 949 IPR039261 -
Lal16g1181 949 Pfam Ferric reductase like transmembrane component 426 582 IPR013130 -
Lal16g1181 949 Pfam Respiratory burst NADPH oxidase 167 266 IPR013623 GO:0004601|GO:0050664
Lal16g1181 949 MobiDBLite consensus disorder prediction 17 33 - -
Lal16g1181 949 PANTHER NADPH OXIDASE 27 949 - -
Lal16g1181 949 SFLD Ferric reductase subgroup (FRE) 382 949 - -
Lal16g1181 949 PRINTS Cytochrome B-245 heavy chain signature 527 550 IPR000778 GO:0016020|GO:0016491
Lal16g1181 949 PRINTS Cytochrome B-245 heavy chain signature 727 740 IPR000778 GO:0016020|GO:0016491
Lal16g1181 949 PRINTS Cytochrome B-245 heavy chain signature 750 767 IPR000778 GO:0016020|GO:0016491
Lal16g1181 949 MobiDBLite consensus disorder prediction 129 148 - -
Lal16g1181 949 SUPERFAMILY EF-hand 195 345 IPR011992 -
Lal16g1181 949 MobiDBLite consensus disorder prediction 129 144 - -
Lal16g1181 949 Coils Coil 294 314 - -
Lal16g1181 949 Gene3D Translation factors 612 704 - -
Lal16g1181 949 CDD NOX_Duox_like_FAD_NADP 628 949 - -
Lal16g1181 949 PANTHER RESPIRATORY BURST OXIDASE2 27 949 - -
Lal16g1181 949 Pfam Ferric reductase NAD binding domain 745 931 IPR013121 GO:0016491
Lal16g1181 949 Pfam FAD-binding domain 625 738 IPR013112 GO:0016491
Lal16g1181 949 ProSiteProfiles EF-hand calcium-binding domain profile. 263 298 IPR002048 GO:0005509
Lal16g1181 949 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1181 Lal-Chr16 8099649 8108235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1181 9 949 Miscellaneous Gene Families AT1G64060 76.825 0.0 1518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1181 K13447 - gmx:100801077 1641.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1181 16 8099649 8108235 Lal16g1181 16 8099649 8108235 ECH