Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1163 ATGAGGACACTGAGGATTGATTATTTGAAGCATAAGTTTGGCTATAATCACAAGAATCTTCTCCTTAATTTGGTTCTTACCATTTTCTTATTTGGACTGGCTTCCAAATTTGTCTTCTTTCATTCCCTGTCCCCTGAAATTTCTCCAGATTTAGAACACCCTTTTGCTGAGAAAACAAACACTGACCCAGTAACTGAAAATCAAACAACACTTTCAGAACAAGTTCCTCAACTGGCACCTGTTTTGGAACATGTTTTTCAAAATGAAGATCAAGTGTCTCCCTCAAATAAGAAATGTGATTACTTTAGTGGGGATTGGGTCCCTAATCCAGTTGGTCCAGTTTATACCAATGAAAGCTGCAATCTTATTGAATCTCCTCAAAATTGCTTGAAGAATGGGAGGCCTGACAAAGATTTTCTGTATTGGAAGTGGGTTCCAAGAGATTGTGATTTGCCTCCATTTGATCCATATAAGTTTCTGAATGCAATGCGCAATAAAAAATGGGCACTGATTGGCGATTCCATATCCCGCAACCATGTACAATCCCTCTTGTGTATGCTTTCGACGGTGGAACAACCCGTATTGGTCTACCACGACGAGGAGTATAAGTCTAAAAGCTGGCACTTCCCCTCATACAACTTCAATATTTCAGTTATTTGGTCACCCTTCCTTGTAGAAGCTGCTATTTTTGAAGACTTCAATGGTGTTTCAAGTTCCGAAGTTGAATTATATCTCGACAAATTGGATGGTAAATGGAAGGATCAGTTCCTGAACTTTGATTACATTATCATTTCATGTGGGAAATGGTTTCTCAAATCTGCAATCTACTACGAGAATGACACTATATTGGGCTGCCACTACTGCAATAAAAAGAACCTGACCGAGCTGGGATTTAACTTCGCTTACCGAAAATCCCTGAAGTTCGTGTTGAACTTCATAGCGTCTTCCAATCACAAGGGCACGATTTTTTTCAGGACATTCACACCTGATCATTTTGAAAATGGTGAATGGTTTAGTGGGGGAACCTGCAATAGAAAAGCACCAGTTAAGGAAGACGAGATCGAAATGAAGTATTTGAACAAGATGCTTCGCAATATTGAGTTGGAGGAGTTCGGAAAGGTAGCTGCAAAAGCTTCAAGAAGTGGGGTAAATCTTAAACTTGTTGATTTGGCACCACTTTCTCTTTTGAGACCAGATGGACATCCTGGTCCATATAGAGAGTTCCATCCATTTGGCAACAAAGGTAAGAATGCCAAAGTTCAAAATGATTGTTTGCATTGGTGCTTACCTGGCCCAATAGATTCTTGGAATGATATACTAATGCAGATGGTTGTTAATACATGA 1344 0.3951 MRTLRIDYLKHKFGYNHKNLLLNLVLTIFLFGLASKFVFFHSLSPEISPDLEHPFAEKTNTDPVTENQTTLSEQVPQLAPVLEHVFQNEDQVSPSNKKCDYFSGDWVPNPVGPVYTNESCNLIESPQNCLKNGRPDKDFLYWKWVPRDCDLPPFDPYKFLNAMRNKKWALIGDSISRNHVQSLLCMLSTVEQPVLVYHDEEYKSKSWHFPSYNFNISVIWSPFLVEAAIFEDFNGVSSSEVELYLDKLDGKWKDQFLNFDYIIISCGKWFLKSAIYYENDTILGCHYCNKKNLTELGFNFAYRKSLKFVLNFIASSNHKGTIFFRTFTPDHFENGEWFSGGTCNRKAPVKEDEIEMKYLNKMLRNIELEEFGKVAAKASRSGVNLKLVDLAPLSLLRPDGHPGPYREFHPFGNKGKNAKVQNDCLHWCLPGPIDSWNDILMQMVVNT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1163 447 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 151 443 IPR026057 GO:0016740
Lal16g1163 447 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 446 IPR029962 GO:0016413
Lal16g1163 447 Coils Coil 349 369 - -
Lal16g1163 447 Pfam PMR5 N terminal Domain 97 150 IPR025846 -
Lal16g1163 447 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 24 12 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1163 Lal-Chr16 7935386 7938700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1163 - - gmx:100816814 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1163 16 7935386 7938700 Lal16g1163 16 7935386 7938700 ECH
Lal16g1163 16 7935386 7938700 Lal15g1444 15 16652231 16655634 LSH