Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1140 ATGGAGAACAATCAACAATCATTTTGGCAATTCAGTGACCAGTTGAGAGTTCAGAACTCTAATCTGGCTAATCTTTCTCTTAATGAATCAATTTGGAGCAACAACTACACATCCAAGAATGAAAGGAGAAATTTTGATATCAAAGTTGGTGGTGAAATCAATTCATTTGGTGGTAGCAACAGAAGTAACAACAACATCAACAACAACATAAAGTCAACAACAAAAGCAACAACACCAACTTCTGATTTCAATGATGGGTGGAAGCAGATGAGTTCTATGAGCAACAATACCAATGGATCTCTTTTCAATATGCCTCATAACATGTATGGTATGGATGGTGGAGCTTCACTTAATGGAGGTTTCAACAAAGGAATTTATTCTAAACCCTCATATGGTAACCTTAACAATAGTTATAATAACCTTAACATGGATATTATTAATGTTAAGGGTCAAAAGGGTAAGGGTGAAGATGAGTTTGGTCATCTTTATCAACACAAAAGTTCAAAGAAGAATAACAACTCCAACAAGAAGAACGGGGACAACAATAATAATAACAATGATACAAACAAGAAATATAAGACACTGCCTCCATCTGAGTCTCTTCCTAGGAATGAAACAATTGGTGGCTACATCTTTGTTTGCAACAACGATACCATGGCAGAGAATCTCAAAAGGGAGCTCTTTGGTCTGCCTCCAAGATACAGAGATTCAGTAAGGGCTATCACTCCAGGGTTGCCCCTTTTTCTTTACAACTATTCCACCCACCAACTCCATGGGATCTTTGAGGCTGCAAGTTTTGGAGGATCAAATATTGATCCATCAGCTTGGGAGGACAAGAAATGCATCGGCGAATCTCGTTTCCCTGCTCAGGTAAGAGTGATCACTAGGAAAATTTGTGAACCATTGGAGGAGGATTCCTTCAGGCCAATCCTTCATCACTATGATGGACCTAAGTTCCGTCTTGAGCTGAATGTGCCCGAGGCACTGTCTCTGTTGGATATTTTTGCAGATCAAGATATCAATGAGACTTTCAAGGCTATACCAGCTTAA 1050 0.3905 MENNQQSFWQFSDQLRVQNSNLANLSLNESIWSNNYTSKNERRNFDIKVGGEINSFGGSNRSNNNINNNIKSTTKATTPTSDFNDGWKQMSSMSNNTNGSLFNMPHNMYGMDGGASLNGGFNKGIYSKPSYGNLNNSYNNLNMDIINVKGQKGKGEDEFGHLYQHKSSKKNNNSNKKNGDNNNNNNDTNKKYKTLPPSESLPRNETIGGYIFVCNNDTMAENLKRELFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGSNIDPSAWEDKKCIGESRFPAQVRVITRKICEPLEEDSFRPILHHYDGPKFRLELNVPEALSLLDIFADQDINETFKAIPA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1140 349 Pfam Development and cell death domain 208 335 IPR013989 -
Lal16g1140 349 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 4 349 - -
Lal16g1140 349 ProSiteProfiles DCD domain profile. 205 337 IPR013989 -
Lal16g1140 349 MobiDBLite consensus disorder prediction 166 201 - -
Lal16g1140 349 PANTHER - 4 349 IPR044832 GO:0034976
Lal16g1140 349 SMART dcd 205 337 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1140 Lal-Chr16 7774937 7778088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1140 - - gmx:100808989 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1140 16 7774937 7778088 Lal16g1140 16 7774937 7778088 ECH
Lal16g1140 16 7774937 7778088 Lal15g1457 15 16789061 16791543 LSH