Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1134 ATGGCTCATTCGTGGGCACGCGGATCTTTGATTGTTCTAGCTATCATTTCATTCGGATGTCTTTTTGCAATTTCCATTGCAAAAGAGGAAGCCACAAAGTTGGGAACTGTAATTGGAATAGATCTTGGAACAACCTATTCATGTGTTGGTGTTTACAAGAATGGTCATGTTGAAATCATAGCCAACGATCAAGGTAACCGTATCACCCCGTCGTGGGTTGGGTTCACCGATGGTGAGAGACTGATCGGGGAGGCTGCCAAGAATCAGGCAGCTGTCAACCCTGAAAGGACCATCTTCGATGTCAAGAGACTTATCGGAAGAAAGTTCCAAGATAAGGAAGTTCAAAAAGACATGAAGCTTGTTCCTTACAAGATTGTGAACAAGGATGGAAAGCCTTACATCCAGGTCAAAATTAAGGACGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTCTGACCAAGATGAAGGAAACTGCTGAAGCATTCCTCGGGAAGAAAATTAATGATGCTGTGGTCACTGTCCCGGCTTATTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCTGGTGTGATTGCTGGACTGAACGTTGCTAGAATTATTAATGAACCCACTGCCGCTGCTATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAGAACATTCTTGTCTTTGATCTTGGGGGTGGAACATTTGATGTCAGTGTCTTGACAATTGATAATGGTGTTTTTGAGGTGCTATCTACAAATGGAGATACTCATCTCGGAGGGGAGGACTTTGATCATAGAATAATGGATTACTTCATTAAATTGATCAAGAAAAAGCATGGAAAGGATATTAGCAAGGACAACAGAGCTCTTGGCAAGCTGAGGAGAGAAAGTGAGCGTGCAAAAAGAGCTCTCAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAATCGCTTTTTGATGGTGTTGATTTCTCTGAGCCACTCACCCGAGCTCGGTTTGAGGAGTTGAACAATGACTTGTTCAGGAAGACAATGGGGCCAGTGAAGAAGGCAATGGACGATGCTGGATTACAGAAGAATCAGATCGATGAGATTGTTCTTGTTGGTGGAAGCACTAGGATTCCCAAGGTACAACAGCTCTTGAAGGATTACTTTGATGGGAAGGAACCAAACAAAGGTGTGAACCCTGATGAGGCAGTTGCTTATGGTGCTGCTGTGCAAGGAGGCATTTTGAGTGGAGAGGGTGGTGATGAAACCAAAGATATCCTTCTTCTGGATGTGGCTCCACTCACCCTTGGAATTGAAACTGTTGGTGGGGTGATGACAAAGTTGATTCCAAGAAATACTGTTATTCCTACCAAGAAATCTCAGGTTTTTACCACCTACCAGGATCAGCAAACTACTGTCTCCATTCAGGTGTTCGAAGGTGAGAGGAGTCTCACAAAGGATTGCAGGCTCCTTGGGAAATTTGATCTGTCTGGAATTCCACCAGCTCCAAGAGGTACACCTCAAATTGAAGTGACCTTTGAAGTTGATGCAAATGGAATCCTAAACGTGAAGGCAGAAGACAAGGGCACCGGTAAAGCTGAAAAGATTACCATTACAAATGAAAAGGGACGCCTGAGCCAGGAAGAAATCGAGCGCATGGTTCGCGAAGCAGAAGAGTTCGCCGAGGAAGACAAGAAGGTCAAGGAGAGGATTGATGCACGTAATGCTCTGGAAACTTACATATACAACATGAAAAACCAGATCGGTGACAAAGACAAGCTCGCTGATAAGTTGGAGTCAGATGAGAAGGAGAAAATTGAGACTGCAGTGAAAGAAGCACTGGAATGGTTGGATGACAACCAGAGTGTGGAGAAAGAAGAGTTTGAAGAGAAGCTCAAAGAGGTTGAAGCTGTTTGTAACCCAATTATCACAGCTGTATATCAGAGATCCGGTGGTGCTCCGGGTGGTGGTGATGCATCGGCCGAGGATGACGATGATTCTCACGATGAGCTCTAG 2004 0.4506 MAHSWARGSLIVLAIISFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDGERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQKDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDHRIMDYFIKLIKKKHGKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKAEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNALETYIYNMKNQIGDKDKLADKLESDEKEKIETAVKEALEWLDDNQSVEKEEFEEKLKEVEAVCNPIITAVYQRSGGAPGGGDASAEDDDDSHDEL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1134 667 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Lal16g1134 667 Gene3D - 570 666 IPR029048 -
Lal16g1134 667 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
Lal16g1134 667 CDD HSPA5-like_NBD 35 409 IPR042050 -
Lal16g1134 667 Gene3D - 220 394 - -
Lal16g1134 667 PANTHER LUMINAL-BINDING PROTEIN 22 652 - -
Lal16g1134 667 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lal16g1134 667 PANTHER HEAT SHOCK PROTEIN 70KDA 22 652 IPR013126 GO:0005524|GO:0140662
Lal16g1134 667 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Lal16g1134 667 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
Lal16g1134 667 Pfam Hsp70 protein 37 644 IPR013126 GO:0005524|GO:0140662
Lal16g1134 667 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 569 IPR029047 -
Lal16g1134 667 Gene3D Actin; Chain A, domain 4 260 343 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 36 49 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 64 76 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 86 94 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 174 194 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 234 244 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 362 378 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 394 414 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 421 440 - -
Lal16g1134 667 PRINTS 70kDa heat shock protein signature 502 518 - -
Lal16g1134 667 Coils Coil 546 566 - -
Lal16g1134 667 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 574 IPR029047 -
Lal16g1134 667 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 651 IPR029048 -
Lal16g1134 667 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Lal16g1134 667 MobiDBLite consensus disorder prediction 643 667 - -
Lal16g1134 667 Gene3D - 38 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1134 Lal-Chr16 7692502 7696449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1134 1 646 Miscellaneous Gene Families AT5G28540 93.034 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1134 K09490 - gmx:547838 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1134 16 7692502 7696449 Lal16g1134 16 7692502 7696449 ECH
Lal16g1134 16 7692502 7696449 Lal15g1462 15 16834293 16838474 LSH
Lal16g1134 16 7692502 7696449 Lal23g0512 23 7912995 7916977 LSH