Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1081 ATGGGGTGTTGCTTCCGTGGCTCCACAACTATGCCACCCATAGAAACCTCAAAACCCATGACTGTTGAAGAATACTACTCAAAACCCATTAATCTGAAACAAGAAGTTATCATACACATACCAAGATGCAAGGTTCATCTGATGGATGAAGGAGAAGCTTTTGAACTAGCTCAAGGTGACTTCATAATCATAAAAACAAAGGATGAGAATGTGTCACTTGCTACAGTAATAAAAGTTGGAGATGATCTTCAATGGCCTTTGACAAAAGATGAGCCTGTAGTGAAGCTTGATGTTCTACATTACCTTTTTACTTTGTCTGTAAAAGATGGTGAGCCCCTTAGTTATGGTGTGTCCTTCTCAGAAGAGAGTTTTGGAAGTTTGAGTTTGTTGGATTCTTTTCTGAAGGAACACTCTTGCTTTTCTGGTTTGAAGTTGAGTAGAAAGAGTGATCTTGATTGGAAGGAGTTTGCACCAAGGGTTGAGGATTATAATCATTTTTTGGCTAAGGTGATTGCAGAAGGAACTGGTCAAATTGTGAAGGGTATCTTCATTTGCAGCAATGCTTACACCAATAAGGTCCACAAAGGAGGAGAAACAATCCTAAATAGTTCTGCAGATGAGAAAAATGGTGTGGTGGCCAGAGAAAGTATGAGAAACAAAACTGCTGATGCCTCAAAGAAGAAGAACATGCTTAATAAAAACCTCAAACGTGTGAGAAAGCTATCCAAGATGACTGAGAAGTTAAGCAAATCTTTACTTAATGGTGTTGGTATAGTTAGTGGAACAGTGATGGGTCCTGTGGTTAAATCCCAAGCAGGAAAAACATTCCTAAAGATGCTTCCTGGTGAGGTGCTTTTGGCTTCTCTTGATGCAGTGAACAAAGTTCTTGATGCAGCTGAAGCTGCTGAGAAACAAACCCTTTCTGCCACCTCCAAAGCTACATCTACAATGGTTTCTAACAGGTTTGGTGAAAATGCTGGAGAAGCTACTGAGCATGTGTTTGCAACTGCAGGACATGCTGCTAGCACTGCATGGAATATCTTTAAGATAAGGAAAGCATTCAATCCAGCTTCTTCAGCAACCAATGGTGCACTGAAAAATGCTGTCAAGATTACAAGTTTTAAATAA 1128 0.3989 MGCCFRGSTTMPPIETSKPMTVEEYYSKPINLKQEVIIHIPRCKVHLMDEGEAFELAQGDFIIIKTKDENVSLATVIKVGDDLQWPLTKDEPVVKLDVLHYLFTLSVKDGEPLSYGVSFSEESFGSLSLLDSFLKEHSCFSGLKLSRKSDLDWKEFAPRVEDYNHFLAKVIAEGTGQIVKGIFICSNAYTNKVHKGGETILNSSADEKNGVVARESMRNKTADASKKKNMLNKNLKRVRKLSKMTEKLSKSLLNGVGIVSGTVMGPVVKSQAGKTFLKMLPGEVLLASLDAVNKVLDAAEAAEKQTLSATSKATSTMVSNRFGENAGEATEHVFATAGHAASTAWNIFKIRKAFNPASSATNGALKNAVKITSFK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1081 375 PANTHER SPARTIN 1 370 IPR045036 -
Lal16g1081 375 Pfam Senescence domain 170 352 IPR009686 -
Lal16g1081 375 PANTHER SENESCENCE/SPARTIN-ASSOCIATED-RELATED 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1081 Lal-Chr16 7246126 7248825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1081 - - mtr:MTR_8g102510 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1081 16 7246126 7248825 Lal16g1081 16 7246126 7248825 ECH
Lal16g1081 16 7246126 7248825 Lal15g1519 15 17328597 17333587 LSH
Lal25g0415 25 2815091 2817938 Lal16g1081 16 7246126 7248825 PCT