Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1024 ATGCAACGCTTTGTTGATAACGTCCTTGCTGTCACTAAAGAGTCAGTGAAGACATTTACTTATGAGTCGTTGAACAATTTTGTGAGGTTAATCAATGGGTTATCTGCTCTTTTGTTGACCTTACTACCTGGAAAAGCTACTATACTTGAAGGTATTCAGGGTTGGGAGCTCAGGCCAACTTTTCGTGGACCGCGATTTCCAGGTTGGATGGAAAATGGCGTATCCTCTTTTAATCAGTTCATTCATGAACTTTCTGTGGATTCTGATACTTCAAGCCTGGAATACTCATCTGGAGAAGAAGTTATTGATGAATATGAATCTCCTCAATCTCAAAGTTCTAGAGCCTCTAGAGCTAGTTTTTCCAATTATGAAAGACATCATATGGATTGGATCCAGTATATCTTACTCTGGATTTTGGTTCCTGTAAAGTTTTTGTTGTTTATTCCACCTTGTCTTTTCCATTTAGCTTCTTCTTGGCTCTCAAATACACATCATCACCCTTCACAGGTACATTCACATACGACGGTGCAAACCCTCAAAGACCAAATTATGCACCGTACCACTGATAGGAGACATGGGGTCATAGAGGACCTTCATCTAGAGTTGGAGATATTTATAGAATGCACGTTTGATGTTGTTCACAAGGCAATACATCTTCTACTTTCCCCATCGGAAGCTTTTGAGACACTAAAATGGTTGTTTTCATCTCATGAAAGGGGCAGTAAAGATGAGCATGGTGAAATTGAGGACACCTCCATTTCTACAGCTACACTTGGAGAGAATGACCTAACACCTACAACGCGGACTATCAGTTTTCAGCAGCCTCTGAACATGGATGCCCGAACATGTCAGGATGTCATAACAGATATAGGGTATCCGTATGAAGCTATTCATGTGATCACTGCAGATGGATATATTCTTCTTTTAGAAAGAATACCTAGGCGAGACGCACGAAAAGCTGTTTATCTTCAGCATGGGGTTTTGGATTCTTCAATGGGTTGGGTATCTAATGGAGTTGTTGGCTCTCCAGCTTTTGCAGCCTATGATCAAGGATATGATGTTTTTCTGGGAAACTTTCGTGGTTTGGTTTCTAGAGAACATGTCAACAAGAACATTTCTTCACATCAATACTGGCAATACTCAATGAATGAGCATGGGACTAAGGACATTCCTGCTATTATAGAAAAAATCCATGAAGTAAAAACTGCTGAATTGAGGCGTAGTAAACCTGATATTAAGGAGGAAGTTAATGATGAACAGCTTTACAAGCTTTGTGCAATTTGCCATAGTTTGGGAGGAGCCGCTATGTTGATGTATGTTATCACGCGTAAGATAGAAGCGAAGCCCCATAGACTTTCAAGATTGATTTTATTGTCACCTGCTGGCTTTCATAATGATTCAAACCTCGTAATCTCAATGGTGGGGCGTGTATTACTATTTCTTGCTCCAGTTTTGTCTCGTATTTTCCCAGCTTTCTACATACCAACCAGATTTTTCCGTATGCTTGTTTTCAAGCTAGTTAGGGACCTGCAGAACCTACCTGCACTTGGAGGATTGGTTCAAACTTCAGTGGGTTATGTGCTTGGTGGTGATAGTTCAGATTGGGTTGGGGTCTTCGGATTACCACACTACAATATGAATGACATGCCGGCAGTATCTTTTTATGTTGCTCTACACTTAGCACAGATTACGAGGTCTAGAAGATTTAGAATGTTTGATTATGGGAGTGTACATGCTAACATGGAGGTGTATGGTTCACCTGGACCTTTAGACTTAGGTGAACACTATGAACTCATCAACATTCCTGTTGATTTGGTTGGTGGACAGAAAGACACAGTAATAAGATCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGATGCTGGTGTTGATGTGTCATATAATGAATTTGAATATGCTCATTTGGACTTCACCTTCTCCCACCATGAAGAACTTTTATCATATGTTATGTCACGTTTGATGCTTGTAGAGCCCAATCCAAAGCATCAAGTGAACCAAAGGGGTTTAAGGTTGAGGAAGAAAGGCCATGTTTCAGCAAAATGA 2067 0.4025 MQRFVDNVLAVTKESVKTFTYESLNNFVRLINGLSALLLTLLPGKATILEGIQGWELRPTFRGPRFPGWMENGVSSFNQFIHELSVDSDTSSLEYSSGEEVIDEYESPQSQSSRASRASFSNYERHHMDWIQYILLWILVPVKFLLFIPPCLFHLASSWLSNTHHHPSQVHSHTTVQTLKDQIMHRTTDRRHGVIEDLHLELEIFIECTFDVVHKAIHLLLSPSEAFETLKWLFSSHERGSKDEHGEIEDTSISTATLGENDLTPTTRTISFQQPLNMDARTCQDVITDIGYPYEAIHVITADGYILLLERIPRRDARKAVYLQHGVLDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSHQYWQYSMNEHGTKDIPAIIEKIHEVKTAELRRSKPDIKEEVNDEQLYKLCAICHSLGGAAMLMYVITRKIEAKPHRLSRLILLSPAGFHNDSNLVISMVGRVLLFLAPVLSRIFPAFYIPTRFFRMLVFKLVRDLQNLPALGGLVQTSVGYVLGGDSSDWVGVFGLPHYNMNDMPAVSFYVALHLAQITRSRRFRMFDYGSVHANMEVYGSPGPLDLGEHYELINIPVDLVGGQKDTVIRSSMVKRHYKLMKDAGVDVSYNEFEYAHLDFTFSHHEELLSYVMSRLMLVEPNPKHQVNQRGLRLRKKGHVSAK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1024 688 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 8 671 - -
Lal16g1024 688 Pfam Partial alpha/beta-hydrolase lipase region 284 338 IPR006693 GO:0006629
Lal16g1024 688 Gene3D alpha/beta hydrolase 272 662 IPR029058 -
Lal16g1024 688 PANTHER LYSOSOMAL ACID LIPASE-RELATED 8 671 - -
Lal16g1024 688 SUPERFAMILY alpha/beta-Hydrolases 281 656 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1024 Lal-Chr16 6823936 6828943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1024 1 672 Lipid Metabolism Gene Families AT1G18460 65.936 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1024 - - gmx:100779931 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1024 16 6823936 6828943 Lal16g1024 16 6823936 6828943 ECH
Lal16g1024 16 6823936 6828943 Lal8g0412 8 2789446 2795429 PCT
Lal16g1024 16 6823936 6828943 Lal10g0992 10 17153380 17159356 PCT
Lal8g0412 8 2789446 2795429 Lal16g1024 16 6823936 6828943 PCT
Lal10g0992 10 17153380 17159356 Lal16g1024 16 6823936 6828943 PCT