Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1022 ATGGCTCGTAATTTTAACCCACCATTGCTTTTCCTCACCACCCTAGCACTAGCATTTTCCTTCATCCTCTCTCTTTCCCCTCATAATGCAGCTGCTACATCCTATGAAATCTCCACCACTGTTCTCTACCTCACACCACCCTCACTCCACCAAGCCCATCAACAAGTCCTCTCATACAACCCGAAAACAACCATCCAACAAAAAAACCAATCCAACCCAACCAAGACCCCTTTTCCCTCATTTTTCTCACTCTCATTACACCCAAGAGACTCTCTTTTCAATCCTCACCATAATGATTACCAAACACTGATCCACTCTCGACTCGACCGTGATTCAGCCCGACTCAACTCAATCATCAACAACTTGGCTTGCAAAACCCGACACAGAAACATAACCGCCCCGATTGTATCGGGCGCAACCCAACACAGCGCAGAATACTTTTCTCGAATAGGAGTAGGCCAGCCAGCCCAACAATTCTACATGTTTCTCGACACAGGGAGCGACATTACATGGCTCCAGTGCAAGCCATGTGACCAATGTTACAAACAATCCGACCCGATTTTCGACCCGAGAAAATCAACCTCTCACAAATCACTTACGTGCAAAGCAAGGCAGTGCAAGAAAACTGAAACGACGTCGTGTATCAACAACACGTGTCAGTATAATGTCTTCTACGGCGATGGTTCTTTAAGCGCAGGAGATTTAATGACCGAAACGGTGTCGTTCGGCTCGACCGGTTCAGTGAAACGGGTTGTAATTGGTTGCGGCCGTTTTAATATCGGTTTATTCGTTGGAGCAGCTGGGGTTCTTGCTCTTGGGAGTGGGCCCCTTTCGTTTCATTCTCAGATCAAAGCGTCGTCGTTTTCATACTGCCTAGTAAACCGTGACTCGCGTAAATCGTCAACTCTGGAGTTTAACTCGCCACGACCGAGTGACTCGTTCACGACTCGGTTATTAAAAAACCCAGAGCAGACTAGTTTGTACTACGTGGAATTCACGGGAATAAACGTGGGAGGCAAAAACGTCGTCGTTCCGAAGTCAACATTTAAGATTAAGAAAAACGGAGAGGGTGGAATGGTAATTGACTCAGGAACCGCGATAACTCGGTTGGAGCCTGGGGCTTATGAGTCAGTGCGTGACGCGTTCAGATTATTAACTAAGGACTTGAAACGCGCGCGTGGGCCAACGCTATTCGACACGTGTTATGACTTAAGGGGAATGAGTGAAGTGGAAGTGCCAACGGTGTCGTTTGAGGTTGGTGAAGGGAAATTATGGAATTTGCCTGGGGAGAATTATATGATTCCGGTGAATGAAAATGGAACATATTGTTTCGCATTTGCAACGTCCAATTTTCCGATATCGATATTAGGGAACGTGCAACAACAGGGTGCGCGTATTAGCTTTGATCTTCGACATTCTATTCTGGGGATCTCACCTCAAAAATGCTAG 1449 0.4658 MARNFNPPLLFLTTLALAFSFILSLSPHNAAATSYEISTTVLYLTPPSLHQAHQQVLSYNPKTTIQQKNQSNPTKTPFPSFFSLSLHPRDSLFNPHHNDYQTLIHSRLDRDSARLNSIINNLACKTRHRNITAPIVSGATQHSAEYFSRIGVGQPAQQFYMFLDTGSDITWLQCKPCDQCYKQSDPIFDPRKSTSHKSLTCKARQCKKTETTSCINNTCQYNVFYGDGSLSAGDLMTETVSFGSTGSVKRVVIGCGRFNIGLFVGAAGVLALGSGPLSFHSQIKASSFSYCLVNRDSRKSSTLEFNSPRPSDSFTTRLLKNPEQTSLYYVEFTGINVGGKNVVVPKSTFKIKKNGEGGMVIDSGTAITRLEPGAYESVRDAFRLLTKDLKRARGPTLFDTCYDLRGMSEVEVPTVSFEVGEGKLWNLPGENYMIPVNENGTYCFAFATSNFPISILGNVQQQGARISFDLRHSILGISPQKC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1022 482 Gene3D Acid Proteases 119 305 IPR021109 -
Lal16g1022 482 ProSiteProfiles Peptidase family A1 domain profile. 146 478 IPR033121 -
Lal16g1022 482 SUPERFAMILY Acid proteases 140 482 IPR021109 -
Lal16g1022 482 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 24 482 - -
Lal16g1022 482 PANTHER ASPARTYL PROTEASES 24 482 IPR001461 GO:0004190|GO:0006508
Lal16g1022 482 Gene3D Acid Proteases 306 482 IPR021109 -
Lal16g1022 482 Pfam Xylanase inhibitor C-terminal 328 478 IPR032799 -
Lal16g1022 482 Pfam Xylanase inhibitor N-terminal 146 305 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1022 Lal-Chr16 6808321 6809769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1022 125 482 Miscellaneous Gene Families AT1G77480 24.242 8.89e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1022 K22683 - gmx:100784849 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1022 16 6808321 6809769 Lal16g1022 16 6808321 6809769 ECH