Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1014 ATGGTGTGTATGGGATTGTTGCATTGCATCATCGGAGAAGAGATGAGCGGTGAGGGTTTATCGGCGAACATGGCAGGAATGTCGAAGAATCAACTCTACCATATCATGTCTCAAATGAAAAATTTGATAGAACAGAATCAGCAACAAGCTAGACACATCCTCATTAATAATCCTCTTTTAACCAAAGCTCTTTTCCAGGCACAAATTATGCTTGGAATGGTGCAATCACCCCATGTGGTTTCAAATGTTCAGCCAATGGTAACGCAGAACACTCAACAGTCAGTACAACCATTACAACAGCCAAATGTTCAGTCTGCTTCATTATTGCATGGGCAAGTTGGTTCACAAGATCAAAACCAACCTTTGGCTGTTCAACCAAGGAAACACCAAAACCAACCATCAGTTCCAGTTCCATCTGCTGCTGTTCCTGCTATGAGTCATCAATCTCAACCCTTGTCTGGCCATTCCTTGCAGATGCCACAACAGCCCAAAGGGCATCTGACTCCCCAAGTACCTCCAGCGTCTCTTCCACTATCGGCACAAATTCCAAACATAACTTCGCCTTCTCTACATACATCTTCGCAACCACTTCATCCACCTCTGCCTGCTGCTTCCAGTCAGTTGCAGCAACCATTGCAGGCATCTGGATTTCCACATATGCCTCAGCAGCCACCACGGCCACAGATCAGGCCACCTTCAGGGCCACCCTTCCATCCCCAGTATCCCGCACAAGTGGGTGCCAATTTGGGTTTTCAACATGCTGGTGCTCCTCACAATATCCCGCAATCTGTGTTTCATCCAGGTACTAAATCTCCTGCTAGTGTTGTAAACACTTTCCCACAGGAGCAGACAACACTTCCTAGCCAACAACCCTCTAAGTCACATTATCAGGTAGGAAATATGCCTTTAGGTGGTGATTTTGGAAATCAAGCCGGAAATGCGATGCAAGTTGATAGACCTTGGATGCCTGGTCCCTCAGAAAACCCAACACAGCTTTCTGGTCCTTCAGGACCTCCTCCATCTATAGTTCCTGGTCAAATGGGTGCTGCCAATCAACCTCTTCGACCTCCTGCGTTGTCACCGGAGATGGAGAAGGCACTGCTTCAGCAAGTCATGAGTCTAACACCAGAGCAGATAAATCTGCTGCCTCCAGAACAAAGAAATCAAGTGCTACAGCTGCAACAGATGTTGCGTCAATGA 1200 0.47 MVCMGLLHCIIGEEMSGEGLSANMAGMSKNQLYHIMSQMKNLIEQNQQQARHILINNPLLTKALFQAQIMLGMVQSPHVVSNVQPMVTQNTQQSVQPLQQPNVQSASLLHGQVGSQDQNQPLAVQPRKHQNQPSVPVPSAAVPAMSHQSQPLSGHSLQMPQQPKGHLTPQVPPASLPLSAQIPNITSPSLHTSSQPLHPPLPAASSQLQQPLQASGFPHMPQQPPRPQIRPPSGPPFHPQYPAQVGANLGFQHAGAPHNIPQSVFHPGTKSPASVVNTFPQEQTTLPSQQPSKSHYQVGNMPLGGDFGNQAGNAMQVDRPWMPGPSENPTQLSGPSGPPPSIVPGQMGAANQPLRPPALSPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1014 399 Gene3D - 11 82 - -
Lal16g1014 399 MobiDBLite consensus disorder prediction 174 217 - -
Lal16g1014 399 MobiDBLite consensus disorder prediction 115 165 - -
Lal16g1014 399 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 12 399 - -
Lal16g1014 399 MobiDBLite consensus disorder prediction 218 239 - -
Lal16g1014 399 Pfam Transcription termination and cleavage factor C-terminal 365 399 IPR026896 GO:0031124
Lal16g1014 399 Pfam Hinge domain of cleavage stimulation factor subunit 2 20 77 IPR025742 -
Lal16g1014 399 MobiDBLite consensus disorder prediction 310 358 - -
Lal16g1014 399 MobiDBLite consensus disorder prediction 115 275 - -
Lal16g1014 399 Gene3D - 360 399 IPR038192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1014 Lal-Chr16 6741119 6743897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1014 - - gmx:100801770 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1014 16 6741119 6743897 Lal16g1014 16 6741119 6743897 ECH