Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0936 AATATGAATGTGAACATTGCAGAAAAAGTTAGTAGTATGGATGAGCGTGAGGTTCAGAAAAGCTATTGGGTTAAACATTCTGTTGATCTCTCCGTCGAAGCCATGATGCTCGATTCCAAAGCCCAACATCTCGACGTTGAAGAGAGACCCGAGGTACTCTCCCTACTACCAGCTTATGAAGGAAAAGCAGTTTTAGAGCTTGGAGCTGGTATTGGAAGATTTACCAGTGAATTGGCTCCAAAAGCTGCTCAGTTGCTTGCTCTGGACTTCATTGAGAGTGCAATAAAGAAGAATGAAAGCATCAATGGGCACCACCAGAATGTTAAGTTTATGTGTGCTGATGTCACATCTCCAGACCTGCATATATCTGAAGGATCAATTGATCTGATATTCTCAAATTGGTTGCTTATGTATCTGTCTGATAATGAGGTTGAGAAATTAGCAGAAAGGATGATGAAATGGTTAAAAGATGATGGATATATATTCTTTAGGGAATCTTGTTTCCATCAATCTGGAGATTCAAAGAGAGAATACAACCCTAGTCACTACAGGGAACCCAGATTTTACACAAAGGTATTTAAAGAGTGCAATATGAGTGATAGTACTGGGGATACCTTTGAACTTTCTCTTGTGGGCTGTAAATGCATTGGAGCATATGTTCGAAATAAAAAAAATCAAAACCAGATTTGTTGGATATGGCAGAAATTAAAGTCACAAGATGACAGGAGGTTCCAGCAGTTTTTAGATAGAGTTGAGTATAACTCTAAGAGTATTTCACGATATGAATGTGTATATGGCCATGGCTTTGCAAGCGCTGGAGGACTTGAAACAACAAAGAAATTTGTGGCAAAGCTAGGGCTAAAGCCTGGTCAGAAAGTACTGGATGTTGGTTGTGGTGTTGGGGGAGGTGACTTCTACATGGCTGAAAATTTTGATGTTGAGGTTGTTGGTGTGGATCTCTCGATAAATATGGTTTCTCTTGCAATTGAACGTGCTATCCGACACAAGTACACAGTTGAATTTGAATGTGCCGATTGCACTAAGAAAACATATCCTGAGAATACATTTGATGTAATCTATTCCCGTGATGTCATGTTGCACATAAAAGATAAACCAACATTATTCAGATCATTTTACAAGTGGTTGAAACCGGGAGGTAAACTTTTAATTACTGATTACTGCAAAAGTGCTGGAAGTCCATCAGTAGAATTTGCTGAGTACATCAAGGAAGGAGGATATTATCTCCATGACATTAAAGAATATGGGCAGATGCTTGAGAATGCTGGATTTGATGATGTTACTGCTGAGGATCAAACTGATCTGTTTGTGAAAACACTAGAACAGGAGTTAAATCACCTTGAGACCAACAAGGATGATTTTATTGAAGACTTAGGCGAGGAAGAACACATTGAAACTATCAAAAGATGGAAGGCAAAGCATATCAGAGGTGCATCAAGAGAGCAGCTATGGGGCTTGTTCTTTGCAGAGAAAAAATGA 1497 0.3908 NMNVNIAEKVSSMDEREVQKSYWVKHSVDLSVEAMMLDSKAQHLDVEERPEVLSLLPAYEGKAVLELGAGIGRFTSELAPKAAQLLALDFIESAIKKNESINGHHQNVKFMCADVTSPDLHISEGSIDLIFSNWLLMYLSDNEVEKLAERMMKWLKDDGYIFFRESCFHQSGDSKREYNPSHYREPRFYTKVFKECNMSDSTGDTFELSLVGCKCIGAYVRNKKNQNQICWIWQKLKSQDDRRFQQFLDRVEYNSKSISRYECVYGHGFASAGGLETTKKFVAKLGLKPGQKVLDVGCGVGGGDFYMAENFDVEVVGVDLSINMVSLAIERAIRHKYTVEFECADCTKKTYPENTFDVIYSRDVMLHIKDKPTLFRSFYKWLKPGGKLLITDYCKSAGSPSVEFAEYIKEGGYYLHDIKEYGQMLENAGFDDVTAEDQTDLFVKTLEQELNHLETNKDDFIEDLGEEEHIETIKRWKAKHIRGASREQLWGLFFAEKK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0936 498 Coils Coil 443 463 - -
Lal16g0936 498 CDD AdoMet_MTases 64 163 - -
Lal16g0936 498 CDD AdoMet_MTases 292 393 - -
Lal16g0936 498 Gene3D Vaccinia Virus protein VP39 16 253 IPR029063 -
Lal16g0936 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 214 IPR029063 -
Lal16g0936 498 Pfam Methyltransferase domain 65 163 IPR013216 GO:0008168
Lal16g0936 498 Pfam Methyltransferase domain 279 434 - -
Lal16g0936 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 259 497 IPR029063 -
Lal16g0936 498 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 13 497 - -
Lal16g0936 498 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 6 498 IPR025771 GO:0000234|GO:0006656
Lal16g0936 498 Gene3D Vaccinia Virus protein VP39 257 498 IPR029063 -
Lal16g0936 498 PANTHER PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE 13 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0936 Lal-Chr16 6213416 6218256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0936 14 498 Acyl Lipid Metabolism Gene Families AT1G48600 71.340 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0936 K05929 - gmx:100820554 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0936 16 6213416 6218256 Lal23g0700 23 9671262 9677734 LSH