Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0935 ATGGGAACAAGGGACGATTACAAGTTTCTTAGCATAAAAGATGCGTATTCATCGATCAACCAGAAAGTGAACCTCATTGCCATTATCATTGAGTTCGGTTTCCCTAAGCGAACTAGGGGCACTGATTACTGCTGTTCCCTAAGAATAATTGATGAAACACATCACCAAACTGGCATGTCGGTCAACATTTTTGCTGAAAATGCAGAAAGACTACCCCATGTTGCTGCAGGTGGAGATATAATTCAGCTTTCTCATGTCATGGTAAAAAAACATGGTGGGGAAATAAATGCTGTTTTCAATAAAAGATATTCCTCGTTTGCTCTATATAAAGGTGAAGATGGTGATGATGTTGCCCCTTATCAATTTTCTTCAAAATTTCTCCAAAGAGATGAGGACAAAATGTTTATTGTCAATCTCAGGAAATGGCTGGTCAGTTTTGAGCTCCGTGAAGATGCAAGTGATTTTCCCATGTTAAGAGAAATCAAGGAAGGTCATATAAATTTGGCATGCAAGATAGTTCATTGCTGTGAGGCTGCACAAGATGAATGGTTTATCTTTGTTTGGGACGGTACTGACACCCCTTCTAATGCAGTATGTTCAAAACTAGAAGATGAAACGAGTTGTCCACTTCCTTTACAACCTGAACGTTTGCCTTTGCCGAGAGAGTTACTTTGTACATTGCCTACGGTTGGATCCATCTTGAGGATAACTTTTGATATAGGTGTTGACAAGAACTATCTCCACCTTCTACCCATTGGTAAATGGATCAAGTTTGTCAATATGCGTCTTGAAGTGCATGCAGGACTATGGTTTGGTGTTTTTACCCCTTTTACAAAGCTTCGATACACTCCCAATGACGACTGCCTCATTCTAGAATGCCAAAGGTTGTATGGTGAGCGGATATCCTTGGAATCGGGAAGAATGCCTTCTTCAAACTTACCTTTGTCATGTATTACAGAGGTTAATTATGATCACGTGCCTTATGTTACTTTAATGGATGTCCTCACCCATTCGGAGGTGACAGCTAAGTTCAAGTGTGTTGCTCGAGTGGTAGCAGTATTGCCTTCTGAACCTGAAAAGTTATGCTCTCCTTTTGGGACATACAGAATGCGCCTCACGTTAGAGGACCCAACAACTAGAATCCATGCTTTTGTATTGGCTGAGGATGGGGAAACTCTTTTTGATGGTTATCCAGACATTGACAATTTGACAAGGAAGCTGAACAGATTACTTGGAATAAGTGATTGTGACGATAGTATTGGGGCAAAGGATGCTCCAAGAAATCCACCATGGGTCCCTTTTTGTCTTAAATCATATTACATTGATAAATCTGATATCTGGGGCTGTAGATACTTTCGAATATTTGACACCAAAATAGTGAAACAAGGCTCTAATGGCACTTGTGTTTTGAAAGCAAATGTGTAA 1425 0.4014 MGTRDDYKFLSIKDAYSSINQKVNLIAIIIEFGFPKRTRGTDYCCSLRIIDETHHQTGMSVNIFAENAERLPHVAAGGDIIQLSHVMVKKHGGEINAVFNKRYSSFALYKGEDGDDVAPYQFSSKFLQRDEDKMFIVNLRKWLVSFELREDASDFPMLREIKEGHINLACKIVHCCEAAQDEWFIFVWDGTDTPSNAVCSKLEDETSCPLPLQPERLPLPRELLCTLPTVGSILRITFDIGVDKNYLHLLPIGKWIKFVNMRLEVHAGLWFGVFTPFTKLRYTPNDDCLILECQRLYGERISLESGRMPSSNLPLSCITEVNYDHVPYVTLMDVLTHSEVTAKFKCVARVVAVLPSEPEKLCSPFGTYRMRLTLEDPTTRIHAFVLAEDGETLFDGYPDIDNLTRKLNRLLGISDCDDSIGAKDAPRNPPWVPFCLKSYYIDKSDIWGCRYFRIFDTKIVKQGSNGTCVLKANV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0935 474 SUPERFAMILY Nucleic acid-binding proteins 8 146 IPR012340 -
Lal16g0935 474 Gene3D - 8 152 IPR012340 -
Lal16g0935 474 SUPERFAMILY Nucleic acid-binding proteins 166 265 IPR012340 -
Lal16g0935 474 SMART Telo_bind_a_2 9 144 IPR011564 GO:0000723|GO:0000781|GO:0003677
Lal16g0935 474 CDD hPOT1_OB1_like 7 142 - -
Lal16g0935 474 PANTHER PROTECTION OF TELOMERES PROTEIN 1A-LIKE ISOFORM X1 6 460 - -
Lal16g0935 474 Pfam Telomeric single stranded DNA binding POT1/CDC13 9 143 IPR011564 GO:0000723|GO:0000781|GO:0003677
Lal16g0935 474 PANTHER PROTECTION OF TELOMERES 1 6 460 IPR028389 GO:0000723|GO:0043047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0935 Lal-Chr16 6205513 6210222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0935 - - jre:108980345 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0935 16 6205513 6210222 Lal16g0935 16 6205513 6210222 ECH