Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0871 ATGACAATGCATCATCACAAATCTAAGCTTCACATTGGAACAGAAAGCTTAGGCTTTTCTTCCATTTCCATTTCTTCAACTTTCCCACCACCATCACCATCATCATCATCATCACTTTCCTTATCTCCAAACACCACCCAAGTTCCAACCTTTTCTTCACCAAACGCACCAGCAACAACACCAACCCAACAAACCAATACCCCATCATCATCATCATCATCATCATCATCAACATTACAAACACAAACTCCAATATTCTCACCCCACAAGAGGCCTATATTGATGAACCACCCTTTCTCACCTCCATCTCCTTCAAGCCACAACAATCACCAAAACTCCTCACAATTCGCAACACCCTTTGGGACAAAATTTCAAACTTTGAAGCCTCTCACTCATTTGCCACGTTTCCTCATCATCCTCTACCTCCCTTCTCTCTACTTCCTCCTCTCAAATCACCACCAATCATTCCTCTTAGATTTCATTTCTCTCATCTCTTTCTCGATATCACTCTTTTTTATTCTCCTTTTCTTCACTAGATTATTATTTTCTTCTAAGCTCTCATCATCATCATCATCATCATCATCTTCCACTCCCACAAATTCTCCTCATAATCCTGTTTTATGGTCTATTGGTTCCAAACCACCAAAGCAATTGAAAACCACAAACACTTCAGGGTCTTATGTGCAAGTTTATAGCAATGGTGATGTGTATGAGGGTGAGTTTCATAAGGGTGAGTGTTCAGGGAGTGGTGTTTATCACTATCACATGATGGGTGGGAAATATGAAGGTGATTGGGTTAGTGGAAAGTATGATGGATTTGGTGTTGAAACATGGGCAAGAGGAAGCAGGTACTGTGGTCAGTATAGGCAAGGTTTGAGGCATGGAATGGGAGTATATAGATTTTACAGTGGTGGTATGTATGCTGGTGAATGGTACAATGGGCAGTGTCATGGTTTTGGAGTCCATACTTGCAATGATGGGAGCCGTTATATTGGGGAGTTTAAATGGGGTGTGAAGCATGGGCTTGGCCAGTACCATTTCAAAAATGGGGACCTATATGCCGGGGAATATTTTGCAGACAACATGCATGGTTTTGGAGTGTATCGATTTCAGAATGGCCATCAGTATGAGGGAGCGTGGCATGAAGGAAGAAGACAAGGACCGGGAAGGTACAGTTTCAGAAATGGGGAAACACAATGTGGTCACTGGCAAAATGGGATTCTTGATAATCAAAACAACCATACTGGGTCTCCATGTGCTGTGGACCATGCTAAGGTTTTAAGTGCAGTCCAGATTGCAAACTGTGCTGCTGGGAAAGTTTACGATATGACGAAGATGGATCAAGGGGTGAATAAAGTGGTGACTGAAGCTAATAAAGCAGCGAACACAGCACGAGTTGCAGCTGTAAAGGCTGTGCAAAACAAGATGCATCATAATAATAATGATATATGA 1452 0.4208 MTMHHHKSKLHIGTESLGFSSISISSTFPPPSPSSSSSLSLSPNTTQVPTFSSPNAPATTPTQQTNTPSSSSSSSSSTLQTQTPIFSPHKRPILMNHPFSPPSPSSHNNHQNSSQFATPFGTKFQTLKPLTHLPRFLIILYLPSLYFLLSNHHQSFLLDFISLISFSISLFFILLFFTRLLFSSKLSSSSSSSSSSTPTNSPHNPVLWSIGSKPPKQLKTTNTSGSYVQVYSNGDVYEGEFHKGECSGSGVYHYHMMGGKYEGDWVSGKYDGFGVETWARGSRYCGQYRQGLRHGMGVYRFYSGGMYAGEWYNGQCHGFGVHTCNDGSRYIGEFKWGVKHGLGQYHFKNGDLYAGEYFADNMHGFGVYRFQNGHQYEGAWHEGRRQGPGRYSFRNGETQCGHWQNGILDNQNNHTGSPCAVDHAKVLSAVQIANCAAGKVYDMTKMDQGVNKVVTEANKAANTARVAAVKAVQNKMHHNNNDI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0871 483 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 224 305 - -
Lal16g0871 483 MobiDBLite consensus disorder prediction 21 83 - -
Lal16g0871 483 MobiDBLite consensus disorder prediction 100 115 - -
Lal16g0871 483 PANTHER MORN REPEAT PROTEIN 79 478 - -
Lal16g0871 483 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 79 478 - -
Lal16g0871 483 SMART morn 328 349 IPR003409 -
Lal16g0871 483 SMART morn 282 303 IPR003409 -
Lal16g0871 483 SMART morn 351 372 IPR003409 -
Lal16g0871 483 SMART morn 374 395 IPR003409 -
Lal16g0871 483 SMART morn 305 326 IPR003409 -
Lal16g0871 483 SMART morn 259 280 IPR003409 -
Lal16g0871 483 SMART morn 235 256 IPR003409 -
Lal16g0871 483 Gene3D - 314 358 - -
Lal16g0871 483 Gene3D - 359 425 - -
Lal16g0871 483 Gene3D - 217 267 - -
Lal16g0871 483 Gene3D - 268 313 - -
Lal16g0871 483 MobiDBLite consensus disorder prediction 96 115 - -
Lal16g0871 483 Pfam MORN repeat 284 306 IPR003409 -
Lal16g0871 483 Pfam MORN repeat 237 254 IPR003409 -
Lal16g0871 483 Pfam MORN repeat 307 329 IPR003409 -
Lal16g0871 483 Pfam MORN repeat 261 283 IPR003409 -
Lal16g0871 483 Pfam MORN repeat 330 351 IPR003409 -
Lal16g0871 483 Pfam MORN repeat 376 397 IPR003409 -
Lal16g0871 483 Pfam MORN repeat 353 374 IPR003409 -
Lal16g0871 483 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 281 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0871 Lal-Chr16 5716809 5721006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0871 231 411 Acyl Lipid Metabolism Gene Families AT1G10900 35.359 5.85e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0871 - - pvu:PHAVU_003G226200g 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0871 16 5716809 5721006 Lal16g0871 16 5716809 5721006 ECH