Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0865 ATGGATGGTCTGATAAGGGGCCTAGTCGACGTCGCTCTCGGTGGTAATCGCAACCACGACGACGGGGATAACAACGACGAACAACGCGATGAACGATCCAGATCCTCTTGGGCTGAGATCGTTTCCGGAGAAGAAGATCACCCCACCCCACAGCAGCAACAAGAACAACAACAGTGGCAAGATGATACTTCAAACACCAGGCCTCATCAGGAAAAATATCTTCCTAAGCAGGGGGAGTGGGAATCTGAGAGTTTCAACACTTCCAATAGACCCCACAAGTCAGATGAAGATAACTGTGATGGATGGCAGACTGTTGGTGATAAGCATTCAAGGCAGCAACACAAGGTTCCAAAGGATAACTGGAACCAATATAAACTACCTTCTGATGAACAACAATACTCTGATGAGGTTGAAGTTGGTGATCGTTTGGAGCCTTCAGAAGATGAACTTACTGATTTGTCACGAGCTTGTGAAAAACTCTGGGATCTTGATTTAAATCGTTTGGTACCTGGCAACGATTATGAAATTGACTGTGGTGAAGGGAAAAAGGTTTTCCAAAAGGATGATATGGCACAAGGGAGCTTGTTCACTTGGGTTAATGATGAAGTATTCAGAAAACCTACTTTTTCTCGTTTTCTTTCACTTTTAGATAATTACAACCCACATCAAGGAAGTAAGGAAGTTGTCACATCTGAAGAGAGGCAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCCATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAGTTGCATCAGGGAGCTACCAAGAATTCAAAAGAATGATGACTAGTTTGTGGTTTGATCTTTATGGTCGTGGTGGGACTTCTGGTTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATTAAGCAGAACAATCAAGTTTCTGGCTTTCATAACTGGCTTCAGTTTTACCATGAAGAAGCAAACGGGAGAGTTGATTATCAAGGCTATATTTTTCCCCGCCGAAGGGGAGAAATTCCGGACTCTGAAACGCAGCTTCTGACAATTCAGTTTGAATGGAATGGTGTTCTGAAATCTGTTTCAAGCACTTTGATTGGAGTTAGCCCTGAATTTGAAGTTGCTTTGTATACCCTGTGTTTCTATGCTGGTGAAGAGGATAACCACATTCAGCTTGGTCCATATGCAGTTAATATCAAGTGCTATCATCTTGGAGATAGAATTGGATCTGTTTTCCCCATTTCAGATTCTTGA 1254 0.4226 MDGLIRGLVDVALGGNRNHDDGDNNDEQRDERSRSSWAEIVSGEEDHPTPQQQQEQQQWQDDTSNTRPHQEKYLPKQGEWESESFNTSNRPHKSDEDNCDGWQTVGDKHSRQQHKVPKDNWNQYKLPSDEQQYSDEVEVGDRLEPSEDELTDLSRACEKLWDLDLNRLVPGNDYEIDCGEGKKVFQKDDMAQGSLFTWVNDEVFRKPTFSRFLSLLDNYNPHQGSKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKGVASGSYQEFKRMMTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQNNQVSGFHNWLQFYHEEANGRVDYQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLIGVSPEFEVALYTLCFYAGEEDNHIQLGPYAVNIKCYHLGDRIGSVFPISDS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0865 417 MobiDBLite consensus disorder prediction 86 118 - -
Lal16g0865 417 Pfam Endoribonuclease XendoU 152 413 IPR018998 GO:0004521
Lal16g0865 417 PANTHER - 19 416 - -
Lal16g0865 417 PANTHER PLACENTAL PROTEIN 11-RELATED 19 416 IPR039787 GO:0004521
Lal16g0865 417 SUPERFAMILY EndoU-like 152 414 IPR037227 -
Lal16g0865 417 MobiDBLite consensus disorder prediction 1 134 - -
Lal16g0865 417 MobiDBLite consensus disorder prediction 46 64 - -
Lal16g0865 417 CDD XendoU 149 413 IPR018998 GO:0004521
Lal16g0865 417 MobiDBLite consensus disorder prediction 16 41 - -
Lal16g0865 417 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 149 417 IPR018998 GO:0004521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0865 Lal-Chr16 5678993 5683879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0865 K14648 - gmx:100813919 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0865 16 5678993 5683879 Lal16g0865 16 5678993 5683879 ECH