Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0861 ATGGCTGAATCAGTGGTGGAGCTTCCGAGTCGATTGGCGATTCTCCCTTTCAGGAATAAGGTTCTCTTACCTGGCGCCATCATCAGAATCCGTTGCACTTCCCCTAGCAGTGTGAAGCTGGTGGAGCAAGAACTTTGGCAAAAAGAAGACAAGGGTTTGATTGGCATCTTGCCAGTGCGTGATGCTGATGAAAGTAAAGCACTGGGTTCCGCTATATCTCAAGGTGGAACCGATTCTCTGGACCAAAGTTCAAAAGTTCAAGGTGGTTCAGCGGATTCTAATAAGCTTGATACAAAAAAACAGAATGATGTGGTCCACTGGCATGCCAGGGGAGTTGCTGCTCGAGCATTACACCTATCAAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATACATAGTTGTTTTGGAAGGTTTGTGCAGATTTAGCGTCCAGGAACTTAGCACAAGAGGGACCTACCATACTGCAAGGATTTCTTCTCTTGAGTTGACTAAGACTGAGATGGAACTAGTGGAGCAAGACCAAGATTTCATAATGTTGTCTCGCCAATTTAAGGCAACGGCCATGGAGCTTATTTCTGTTTTGGAGCTGAAGCAAAAAACCGGAGGAAGGACAAAAGTCCTTTTGGAGACTGTACCAGTTCACAAGTTGGCAGATATATTTGCTGCTAGTTTTGAGATAAGTTTTGAAGAACAGTTATCTATGTTAGATGCTGTTGACCCCAAAGTGAGGCTTTCGAAAGCGACTGAGTTAGTTGACAGGCACTTACAATCAATACGTGTAGCTGAGAAAATTACACAAAAGGTTGAAGGACAATTGTCAAAATCTCAAAAAGAATTTCTTCTGCGCCAGCAGATGAGGGCTATTAAAGAGGAACTTGGTGATAATGATGATGATGAGGATGACCTGGTTGCCTTGGAAAGAAAGATGGAAAGCGCAGGAATGCCCCAGAATGTATCAAAGCTTGCACACAGAGAGTTGAGGAGGCTTAAGAAGATGCAGCCTCAGCAACCTGGGTATAATAGTTCAAGGGTTTACCTAGAACTTCTTGCTGATCTACCCTGGCAGAAGGCCAGCGAAGAGATTGAATTAGACTTGAGAGCTGCACGGGAGCGACTGGACAGTGATCACTATGGTTTGGTGAAGGTCAAGCAACGGATAATTGAATACCTGGCAGTTCGTAAGGTTGTCAAAAATCATATTGCTGTTGTACTTAAACCAGATGCAAAGGGTCCTGTGTTGTGCTTTATCGGACCACCAGGTGTCGGGAAAACATCATTGGCATCTTCTATTGCTTCTGCACTGGGCAGAAAATTTGTGCGCATATCCCTTGGTGGAGTCAAGGATGAGGCTGATATTAGAGGGCATAGGAGAACATATGTTGGAAGCATGCCTGGGAGGCTTATAGACGGATTAAAGAAAGTAGCTGTTTGCAATCCTGTTATGTTGCTTGATGAAGTTGACAAGACTGGTTCTGATGTTCGTGGAGACCCAGCTTCAGCATTGTTGGAGATTATCAGCTCTCATGTGAATTTTCATAACAAGTTTGCTATTGATCTTGCTATAGCAATCTTTTTAGCTAGCTATTTGAATGTTCCATTTGATCTATCCAAGGTAGTTTTTGTGGCTACAGCAAATAGGATGCAGCCTATTTCTCCTCCACTTCTTGATCGGATGGAAGTAATTGAGCTTCCTGGATATACACCTGAGGAAAAGCTCCAAATAGCCATGCGGCATTTGATTCCAAGAGTTTTGGACCAGCATGGTTTGAGCTCCGAGTTCCTTCAGATTCCAGAGGGGATGGTGAAACTTGTTATTCAGAGATATACCAGGGAAGCTGGTGTACGAAGTTTGGAGAGGAATCTCGCTGCCCTGGCTCGTGCAGCTGCAGTTAGAGTTGCAGAACAAGAGCATGTAGTTCCACTAGACAAAGGGGTGGAGGGACTTGCTGCACCACTTCTGGAAAACAGACTTGCTGATAGCACTGAAGTTGAAATGGAAGTGATACCGATGAGTGACAATAGTCAGGATCTTTCAAACACATTCAGAGTTGCCTCTCCATTGGTTGTTGATGAAGCCATGCTTGAAAAAGTTCTTGGGGCTCCAAGATTTGATGATAGAGAAGCCTCAGAACGCGTTGCATCCCCTGGGGTCACTGTTGGGCTGGTTTGGACTGCCTTTGGTGGAGAAGTTCAGTTTGTGGAAGCAACAGCAATGGCAGGGAAGGGTGAACTGCATCTCACTGGACAACTTGGTGATGTAATAAAAGAATCTGCACAGATTGCACTGACATGGGTAAGGGCAAGGGCTGCTGATCTCAATTTGGCTGCTGCAGAGAGAGTTAACCTTTTGGAAGATCGTGATGTACATATACATTTTCCTGCTGGTGGTGTACCTAAAGATGGGCCCTCAGCAGGTGTGACTTTGGTCACAACATTGGTATCACTTTTCAGTCAGAAAAGAGTGAGATCAGATACAGCTATGACTGGAGAGATGACTTTGAGGGGTCTTGTGCTACCTGTTGGTGGTGTCAAGGATAAGATATTAGCTGCACATCGTTATGGTATTAAGAGAGTTATCCTGCCTGAAAGAAACTTAAAGGACTTAGCTGAAGTACCATCATCAGTGCTAGCCAATTTAGAGATACTGCTTGCTAAAAAAATAGAAGATGTGTTAGAGCATGCTTTTGAAGGTGGAAGCCCTTGGAGGCAACACTCAAAGTTATAG 2727 0.4455 MAESVVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQKEDKGLIGILPVRDADESKALGSAISQGGTDSLDQSSKVQGGSADSNKLDTKKQNDVVHWHARGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLELTKTEMELVEQDQDFIMLSRQFKATAMELISVLELKQKTGGRTKVLLETVPVHKLADIFAASFEISFEEQLSMLDAVDPKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMESAGMPQNVSKLAHRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKASEEIELDLRAARERLDSDHYGLVKVKQRIIEYLAVRKVVKNHIAVVLKPDAKGPVLCFIGPPGVGKTSLASSIASALGRKFVRISLGGVKDEADIRGHRRTYVGSMPGRLIDGLKKVAVCNPVMLLDEVDKTGSDVRGDPASALLEIISSHVNFHNKFAIDLAIAIFLASYLNVPFDLSKVVFVATANRMQPISPPLLDRMEVIELPGYTPEEKLQIAMRHLIPRVLDQHGLSSEFLQIPEGMVKLVIQRYTREAGVRSLERNLAALARAAAVRVAEQEHVVPLDKGVEGLAAPLLENRLADSTEVEMEVIPMSDNSQDLSNTFRVASPLVVDEAMLEKVLGAPRFDDREASERVASPGVTVGLVWTAFGGEVQFVEATAMAGKGELHLTGQLGDVIKESAQIALTWVRARAADLNLAAAERVNLLEDRDVHIHFPAGGVPKDGPSAGVTLVTTLVSLFSQKRVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLAEVPSSVLANLEILLAKKIEDVLEHAFEGGSPWRQHSKL 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0861 908 Gene3D - 162 297 - -
Lal16g0861 908 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 801 809 IPR008268 GO:0004176|GO:0004252|GO:0006508
Lal16g0861 908 SUPERFAMILY PUA domain-like 11 253 IPR015947 -
Lal16g0861 908 Coils Coil 289 309 - -
Lal16g0861 908 TIGRFAM lon: endopeptidase La 14 896 IPR004815 GO:0004176|GO:0005524|GO:0006508
Lal16g0861 908 Gene3D - 715 905 IPR014721 -
Lal16g0861 908 Gene3D - 565 704 - -
Lal16g0861 908 ProSiteProfiles Lon proteolytic domain profile. 713 898 IPR008269 GO:0004176|GO:0004252|GO:0006508
Lal16g0861 908 Gene3D - 366 564 IPR027417 -
Lal16g0861 908 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 908 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Lal16g0861 908 MobiDBLite consensus disorder prediction 68 97 - -
Lal16g0861 908 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 908 - -
Lal16g0861 908 Gene3D - 305 353 - -
Lal16g0861 908 ProSiteProfiles Lon N-terminal domain profile. 12 254 IPR003111 -
Lal16g0861 908 MobiDBLite consensus disorder prediction 70 95 - -
Lal16g0861 908 Pfam ATPase family associated with various cellular activities (AAA) 414 562 IPR003959 GO:0005524|GO:0016887
Lal16g0861 908 Gene3D - 3 161 IPR046336 -
Lal16g0861 908 SUPERFAMILY Ribosomal protein S5 domain 2-like 716 896 IPR020568 -
Lal16g0861 908 Pfam Lon protease (S16) C-terminal proteolytic domain 690 897 IPR008269 GO:0004176|GO:0004252|GO:0006508
Lal16g0861 908 SMART AAA_5 410 566 IPR003593 -
Lal16g0861 908 CDD AAA 386 567 - -
Lal16g0861 908 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 418 437 - -
Lal16g0861 908 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 716 732 - -
Lal16g0861 908 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 798 817 - -
Lal16g0861 908 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 828 847 - -
Lal16g0861 908 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 851 869 - -
Lal16g0861 908 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 4 908 IPR027501 GO:0004252|GO:0006515
Lal16g0861 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 641 IPR027417 -
Lal16g0861 908 SMART lon_5 11 254 IPR003111 -
Lal16g0861 908 PIRSF Lon_proteas 2 647 IPR004815 GO:0004176|GO:0005524|GO:0006508
Lal16g0861 908 PIRSF Lon_proteas 675 900 IPR004815 GO:0004176|GO:0005524|GO:0006508
Lal16g0861 908 Pfam ATP-dependent protease La (LON) substrate-binding domain 12 254 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0861 Lal-Chr16 5626399 5642642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0861 K01338 - gmx:100789982 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0861 16 5626399 5642642 Lal16g0861 16 5626399 5642642 ECH