Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0839 ATGATGGAGGAGGTTGAGAACAAGAAAAAATACATAACTCCTGAGGAGTTGGAAAAGCACAACAAGCAAGGAGATTTGTGGATCTCTATTAAGGGTAAAGTTTATAATGTGACAGATTGGGCTAAGGTACACCCTGGTGGAGATATTCCAATCTTGAACCTTGCTGGCCAGGATGTTACTGATGCATTCATTGCTTACCATCCTGGCACAGCATGGAAATATCTTGACAAATTTTTCACTGGATATTACCTCAAAGATTTCAAGGTATCTGAGGTGTCCAGGGATTATAGGAACCTTGTGTCTGAGTTTTCAAAATTAGGCCTTTTTGAAAAGAAAGAGCATGTCACTTTATTTACATTGACTTCTGTTGCTGTTATGTTTGGTATTGTTCTTTATGGTGTTCTGAGATGCACTAGTGTTTGGGCTCATTTGGGTTCTGCTATGTTGTTGGGTTTGCTTTGGATGCAAAGCACTTATGTTGGTCATGATTCTGGTCACTATGAGGTTATGCAGAGCCGCGGTTATAACAAACTTGCTCAGATCATTTGTGGGAATTGCGTGACTGGGATTAGCATTGCTTGGTGGAAATGGACTCACAATGCTCACCACATTGCCTGCAATAGTCTTGACTACGATCCCGATCTACAACATATCCCGGTTTTCGCAGTATCCTCACGGTTCTTTAGCTCAATTAAATCTTGCTTCTATGGCAGGCAGTTAAAGTTTGATACTTTGTCAAGGCTTCTGGTTAGTTACCAGCACTGGACATTTTATCCGGTCCTGTGTGTTGCAAGGGTGAACCTATACTTGCAGACTCTTCTGCTTCTGTTTTCGCGGCGTAAAGTCCCGGATAGATCTTTCAACATAATGGGAATCCTTGTGTTTTGGACTTGGTTCCCTCTTCTGATTTCATGCCTACCAAATTGGCCAGAGAGGGTTATGTTTGTGCTTGCTAGCTTCTGTGTTTGTTCCATTCAGCATCTTCAATTCTGTTTGAACCATTTTGCTGCTAATGTGTATATGGGGCCACCAAATGGAAATGACTGGTTTGAGAAGCAAACAGCTGGGACATTAGATATCTCTTGTTCAAGATGGATGGATTGGTTCTTTGGTGGTTTGCAATTTCAACTTGAGCACCACTTATTTCCAAGGCTTCCAAGAGCACAATTAAGAAAGATTTCACCTTTGGTGATTGATCTATGCAAAAAGCATAATTTGCCTTATAGGAGTTTGTCATTCCTTGAGGCCAATAAATGGACTCTTAGGACCCTAAGGACTGCTGCCCTACAAGCTAGGGACCTCAGTAACCCTGCCCAGAATTTGTTGTGGGAAGCTTTTAACACACATGGATGA 1353 0.4176 MMEEVENKKKYITPEELEKHNKQGDLWISIKGKVYNVTDWAKVHPGGDIPILNLAGQDVTDAFIAYHPGTAWKYLDKFFTGYYLKDFKVSEVSRDYRNLVSEFSKLGLFEKKEHVTLFTLTSVAVMFGIVLYGVLRCTSVWAHLGSAMLLGLLWMQSTYVGHDSGHYEVMQSRGYNKLAQIICGNCVTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSSRFFSSIKSCFYGRQLKFDTLSRLLVSYQHWTFYPVLCVARVNLYLQTLLLLFSRRKVPDRSFNIMGILVFWTWFPLLISCLPNWPERVMFVLASFCVCSIQHLQFCLNHFAANVYMGPPNGNDWFEKQTAGTLDISCSRWMDWFFGGLQFQLEHHLFPRLPRAQLRKISPLVIDLCKKHNLPYRSLSFLEANKWTLRTLRTAALQARDLSNPAQNLLWEAFNTHG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0839 450 PANTHER FATTY ACID DESATURASE 2 6 449 IPR012171 GO:0016491
Lal16g0839 450 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 86 IPR036400 -
Lal16g0839 450 PIRSF FA_sphingolip_des 1 440 IPR012171 GO:0016491
Lal16g0839 450 CDD Delta6-FADS-like 144 406 - -
Lal16g0839 450 Pfam Fatty acid desaturase 140 410 IPR005804 GO:0006629
Lal16g0839 450 SMART Cyt_b5_2 12 84 IPR001199 -
Lal16g0839 450 Pfam Cytochrome b5-like Heme/Steroid binding domain 13 83 IPR001199 -
Lal16g0839 450 Gene3D - 2 88 IPR036400 -
Lal16g0839 450 PANTHER FATTY ACID/SPHINGOLIPID DESATURASE 6 449 - -
Lal16g0839 450 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 9 84 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0839 Lal-Chr16 5428329 5429681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0839 6 450 Lipid Metabolism Gene Families AT2G46210 73.318 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0839 K21734 - gmx:100781495 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0839 16 5428329 5429681 Lal16g0839 16 5428329 5429681 ECH