Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0837 ATGGTAGAATCATTCCTCCTCCGAGCTGGTATATGTCTGAGTCTTGGCACGTGCTTTGGAATGGCTCATTATCGAAACAATAGTGAATTGTTCACTGAGAGAAGAGGCATTATTTATACAATTTTCAACTCTCTTGGCAAAAGTTTTCATGGCTCTCGAGTTTTACGTCGTAGTAGAAGGTTTGGTCGGATTACAAAAAACAGACTTTCGCGTTGGGTTTTCTTTCTTGCTGCACTCTTTTCGATTTGTTTGACAGTGTATGGCCTGAAAATGTTTTTCCAAGCTAAAATTGAATCTACACTCTCATTGCCACACAATCTACAACAAGAACGAAACATAGCAGAAACTATTTTGGTATCTGATGCTGGAAGGCCACCTAAAAGCAAGCATCGGAAGCAACATTTTCCTTGTGAAGTTCAATTTATGAAATCAGTAGATGGCCTCGTTGAACCCAAGAGTTACATGAACTTCTCACAGTTTTCTCTAGAATATGTTGATGAAGAAGAAAAGCTTTCCGAAAATGATTTATTTGAACCTCAATTTGGAGGACACCAGACTCTTGAGGAAAGAGAGAAATCATTTTATGCGAATAACCAGACACTTCATTGTGGTTTTGTCAAGGGGCCACTTGGATATTCAAGCACTGGATTTGATTTAAATGAAAAAGACAAGGCATACATGTTCAGCTGTAAGGTTGTGGTTTCTTCCTGCATTTTTGGTAGCTCTGATTTTCTACGAAGGCCTACAAGCAGACTGATCAGCCAATATTCAAAAGACAATGTTTGTTTTGTTATGTTCTTGGATGATCAAACACTGTCCAAACTTTCATCAGAAGGAAACTATCCTGATGATAGAGGGTACATTGGCCTATGGAAAGTAGTTACTGTAAAAAATTTGCCATATGATGACATGCGGAGAACTGGCAAGGTGCCAAAATTTTTATCACATCGCCTCTTTCCAAATGCTAGGTATTCGATTTGGCTTGACAGCAAAATGCGACTCAATTCTGATCCAATGCTGATGATTGAATATTTTTTGTGGCGGAGGAACACAGAATATGCGATTTCGAATCATTATGATCGCCACTGTGTCTGGGAGGAGGTACTCCAAAATAAACGCTTAAATAAGTATAACCATACAGCAATTGATGAGCAGTTTAACTTTTACCAGTCTGATGGCCTGACCAAGTTTGACCCTTCAGACCCAAATAATCTTCTTCCGAATGTCCCCGAGGGTTCCTTGATAGTCAGGGCACATACACCAATGTCAAATTTATTTTCATGTCTTTGGTTCAATGAAGTTGATCGATTTACATCTCGTGATCAACTAAGCTTTGCTTATACTTATTTGAAACTCAGGAGAATGAATCCAGAGAGGCCATTTCGACTATATATGTTCAAGGATTGTGAACGCAGAGCATTAGTGAAGCTGTTCCGGCACAGGACACTTCCTTCTCCACCAGACACTGCTTGA 1473 0.3944 MVESFLLRAGICLSLGTCFGMAHYRNNSELFTERRGIIYTIFNSLGKSFHGSRVLRRSRRFGRITKNRLSRWVFFLAALFSICLTVYGLKMFFQAKIESTLSLPHNLQQERNIAETILVSDAGRPPKSKHRKQHFPCEVQFMKSVDGLVEPKSYMNFSQFSLEYVDEEEKLSENDLFEPQFGGHQTLEEREKSFYANNQTLHCGFVKGPLGYSSTGFDLNEKDKAYMFSCKVVVSSCIFGSSDFLRRPTSRLISQYSKDNVCFVMFLDDQTLSKLSSEGNYPDDRGYIGLWKVVTVKNLPYDDMRRTGKVPKFLSHRLFPNARYSIWLDSKMRLNSDPMLMIEYFLWRRNTEYAISNHYDRHCVWEEVLQNKRLNKYNHTAIDEQFNFYQSDGLTKFDPSDPNNLLPNVPEGSLIVRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPERPFRLYMFKDCERRALVKLFRHRTLPSPPDTA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0837 490 Pfam Protein of unknown function (DUF616) 162 480 IPR006852 -
Lal16g0837 490 PANTHER ALKALINE CERAMIDASE-RELATED 52 487 IPR006852 -
Lal16g0837 490 PANTHER BNAA02G26630D PROTEIN 52 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0837 Lal-Chr16 5415135 5421961 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0837 - - gmx:100807624 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0837 16 5415135 5421961 Lal16g0837 16 5415135 5421961 ECH