Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0836 ATGGCAAAAATTAATTCAGCTGATGGTAGGACTAGAAGCTCTCTGCAGATCTTTATAGTAGTTGGCTTGTGCTGTTTCTTTTATATTTTGGGAGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGCATAGCGTTGCAGATTACAAAGAGTAGTGAAGAATGTAACATAGTTCCAAATTTAAGTTTTGACACCCACCATGGTGGAGAAGTTAGCAAAATTGATGAAGGTGATTCAAAACCAAAGGTATTTAAACCATGCCATGCTCGTTACACAGATTACACTCCCTGCCAGGACCAACAGCGTGCCATGACCTTTCCAAGAGAAAACATGAACTATCGAGAGAGACACTGTCCCCGAGAGGAAGAGAAGTTACACTGTTTAATCCCAGCACCCAAGGGATATGTAACTCCATTTCCGTGGCCGAAGAGCCGTGATTATGTTCCATATGCTAATGCACCCTACAAGAGCCTTACAGTTGAGAAGGCTATTCAGAATTGGGTCCAATATGAGGGAAATGTGTTCAGGTTCCCTGGTGGTGGAACCCAATTTCCTCAAGGTGCAGAGAAATATATTGATCAACTTGCATCTGTTATACCTATTGCTAATGGGACAGTGAGGACGCTACTGGACACTGGTTGTGGGGTTGCCAGCTTGGGTGCATATCTTTGGAGCAGAAATGTTATTGCCATGTCATTTGCACCAAGGGACTCTCATGAAGCACAAGTGCAATTTGCTCTTGAAAGAGGTGTACCTGCTGTTATTGGTGTTCTGGGAACCATAAAAGTTCCTTATCCATCTAGAGCCTTTGACATGGCTCATTGTTCTCGCTGCTTGATTCCTTGGGGAGCAAATGATGGAATGTATATGTTGGAAGTTGACCGAGTTCTAAGGCCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGGAGGTTAACTACAAAGCCTGGCAGAGACCTAAGGAGGAACTTGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCAACTTTGCTGGGAGAAGAGGTCACAGAAGGCTGAAATTGCCATATGGCAAAAGACTGTAGACACTGAATCATGTCGTAGCAGACAAGATGATTCTAGTGTAAAATTTTGTGAAACCTCAGATGCTGATGATGTCTGGTATAAGAAAATGGAGGAATGCGTTACTCCCAGTCCTAAAGCTTCTGCCAGGGGCCTTAAACCATTTCCAAGTAGACTGTATGCAATCCCTCCTAGAATTGCTAGTGGTTCTGTTCCCGGTGTTTCTTCTGATACATATCAGGATGATAACAAAAAGTGGAAAAAGCATGTAGCTGCTTACAAGAAAATTAATAGACTGTTGGATACAGGAAGGTATCGTAACATTTTGGATATGAATGCTGGATTGGGTAGTTTTGCTGCAGCTATTCAATCTCCTAAGTTATGGGTCATGAATGTCATGCCTACTATTGCTGAGAAAAATACACTGGGTGTCATATATGAACGAGGGCTGATTGGCATCTATCATGATTGGTGTGAAGGTTTTTCCACTTATCCAAGGACATACGACCTCATTCATGCCAACGGCCTCTTCAGTCTGTACAAGGATAAATGTAATACAGAAGATATTCTTCTCGAGATGGATCGAATTTTGCGACCAGAAGGTGCTGTCATAATCCGTGATGAAGTCGATGTCTTGATTAAGGTGAAGAAATTAGTGGGGGGAATGAGATGGGATACTAAAATGGTTGATCATGAGGATGGTCCTCTTGTTCCTGAGAAGATACTAATTGCTGTGAAGCAGTACTGGGTTGTTGGGGGAAATACCACATCAACACAATAA 1833 0.4266 MAKINSADGRTRSSLQIFIVVGLCCFFYILGAWQRSGFGKGDSIALQITKSSEECNIVPNLSFDTHHGGEVSKIDEGDSKPKVFKPCHARYTDYTPCQDQQRAMTFPRENMNYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWVQYEGNVFRFPGGGTQFPQGAEKYIDQLASVIPIANGTVRTLLDTGCGVASLGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKVPYPSRAFDMAHCSRCLIPWGANDGMYMLEVDRVLRPGGYWVLSGPPINWEVNYKAWQRPKEELEEEQRKIEEVAKQLCWEKRSQKAEIAIWQKTVDTESCRSRQDDSSVKFCETSDADDVWYKKMEECVTPSPKASARGLKPFPSRLYAIPPRIASGSVPGVSSDTYQDDNKKWKKHVAAYKKINRLLDTGRYRNILDMNAGLGSFAAAIQSPKLWVMNVMPTIAEKNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYKDKCNTEDILLEMDRILRPEGAVIIRDEVDVLIKVKKLVGGMRWDTKMVDHEDGPLVPEKILIAVKQYWVVGGNTTSTQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0836 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 443 559 IPR029063 -
Lal16g0836 610 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 597 IPR004159 GO:0008168
Lal16g0836 610 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 606 IPR004159 GO:0008168
Lal16g0836 610 Coils Coil 323 343 - -
Lal16g0836 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 328 IPR029063 -
Lal16g0836 610 Gene3D Vaccinia Virus protein VP39 160 376 IPR029063 -
Lal16g0836 610 PANTHER METHYLTRANSFERASE PMT2-RELATED 4 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0836 Lal-Chr16 5401456 5406668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0836 - - gmx:100792999 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0836 16 5401456 5406668 Lal16g0836 16 5401456 5406668 ECH