Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0727 ATGGCTGATGATCTCTCTTTCTTCGCTAAGGATGTTTTCCTTGTAAAGGGTTTGAAGAGTTCTACATTGGTGTGGAGACTAGTTGTGTTGACCTTTGCAATGGTATGTGGTGTGTATATATGTTCTGTTTGTCTGAAGCAATTAGGCATTAGCAGCAAGGTTGGTTTTTTAGATATCAATGTCATCCAAAAGCCATGCCAGGAACCCAACATTGAACCGTGGGAGATTCCTTATGTGCACTACCCAAATCCTAAAACTTATAGCAGGGCGGAATGCGCTTGTAACCCGGTGCGATATTTTGCCATTCTGTCAATGCAGAGATCCGGGAGTGGATGGTTTGAGACATTTTTAAACAATCACACTAACATAAGCTCTAACGGGGAAATTTTTTCGGTTAAGGTGAGAAGGAGTAATATGTCAACAATAGCAGAGACTCTGGATAAGATTTATAACTTAGACTGGGTAAGCAGTGCTTCAAAAAATGAGTGCACTGCTGCTGTTGGCTTGAAGTGGATGCTTAATCAGGGTTTGATGCAGAATCATGAAGAAATCGCGGAATACTTCAGAATTCATGGTGTTTCTGTCATATTTCTTTTCAGAAGGAATCTTTTGCGCCGAATGATTTCTGTACTAGCAAATGAATATGATAGGAAAGCTAAGCTATTAAATGGGACTCACAAGTCTCATACTCATTCAGTCAAGGAGGCAGAAATACTTGCAAAATACAAGCCCAAAATCAATGCAACATTGCTGAAACAAAATCTGAGGCAAGTGAATGACACCACAACAAAGGCTCTGGGATATTTCAAGAGCACTAGGCACATTATCTTATACTATGAAGATGTTGTTAAAAACCGCACTAAATTATTGGACGTTCAGGATTTTCTGAAGGTTCCTCGAATGGATTTAAAGAGTCATCAGGTGAAGATACATAAGGGATCATTATCTAGCCAAGTTGAAAATTGGAATGATGTAAATAAGGCACTTATTGGGACACATTACGAGAGTTTCCTACACCAAGATCATTAA 1029 0.3916 MADDLSFFAKDVFLVKGLKSSTLVWRLVVLTFAMVCGVYICSVCLKQLGISSKVGFLDINVIQKPCQEPNIEPWEIPYVHYPNPKTYSRAECACNPVRYFAILSMQRSGSGWFETFLNNHTNISSNGEIFSVKVRRSNMSTIAETLDKIYNLDWVSSASKNECTAAVGLKWMLNQGLMQNHEEIAEYFRIHGVSVIFLFRRNLLRRMISVLANEYDRKAKLLNGTHKSHTHSVKEAEILAKYKPKINATLLKQNLRQVNDTTTKALGYFKSTRHIILYYEDVVKNRTKLLDVQDFLKVPRMDLKSHQVKIHKGSLSSQVENWNDVNKALIGTHYESFLHQDH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0727 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 306 IPR027417 -
Lal16g0727 342 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 341 - -
Lal16g0727 342 Gene3D - 97 327 IPR027417 -
Lal16g0727 342 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0727 Lal-Chr16 4699166 4704530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0727 - - gmx:100799665 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0727 16 4699166 4704530 Lal15g0695 15 4817044 4824653 LSH
Lal16g0727 16 4699166 4704530 Lal23g1343 23 14243760 14247471 LSH