LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal16g0588	ATGGAGCTGAGCTACCCTTCACTCACTCTTCTCTTCATATTCTTGTTCTTCCTTCCTACTTTGATCTCTGCTCAAATCTGCCAAAGAAACTGTGGCAAAGAAGTTCTTAAGTACCCATTTGGAAGTGGCCCTGGTTGCGGCGATCCGCGCTTCCAACCACATGTATCTTGTAGCCAACAAAGGCTCACCTTAACCACTCACAAAGGCTCTTACCTTGTTACCTCAATTGACTATAACAAACAAGTCATATACATCTCAGATCCCACCATGTCAACATGTTCTTGCACTGTCCCTAGCAAAGGCTTTGCCTTAGATTGGGATGCTCCATTCACTTTTGATGATAGTACCATCTTTGCTCTAGTAGACTGTTCAATGAACTCATCATCTATATCCAAAATAAGTGGTTATGTTGATGATGGTACTAATAATTCTAAGCTTCTCTGTGATCTAAGCACACCTATTTGCAGCCTTCTATACTCATGCAGCCCTATTAGTACTATCAACCTTCCAATCTCTACATGTTGTGTTTACACTCCAGTTAATCTTGGTCCATCATTTGACATGGATTTGCAGAAGCTGCAATGCCCTTCATACACCGGATTTTACAACTTCAATGACCAAGAAGTAGATCCTGAAAAGTGGAATTATGGAATAGCACTTAAGTACAAGTTCAGTGTGACAGATGATTTTCCAGGCTCATGTGCTGCTTGTGAAAGGAGCTATGGTGTATGTGGGTACAATGGAGCTTATAATTCATTTATCTGCAATTGTCCTGATGGAATTAACACAACAACAGATTGTTTATTTCCATCATCTTATAATAATGGTTTTAGAAATGGTATGGATTGCATGGTTGATTTATCCTTTGGCATGGTCACTGGTAAGTCTACTCTTGTAGCTAGCTTATTAAGGATGGTACTACAAGACCAGAGTAACGAATCAAAGTAG	948	0.3987	MELSYPSLTLLFIFLFFLPTLISAQICQRNCGKEVLKYPFGSGPGCGDPRFQPHVSCSQQRLTLTTHKGSYLVTSIDYNKQVIYISDPTMSTCSCTVPSKGFALDWDAPFTFDDSTIFALVDCSMNSSSISKISGYVDDGTNNSKLLCDLSTPICSLLYSCSPISTINLPISTCCVYTPVNLGPSFDMDLQKLQCPSYTGFYNFNDQEVDPEKWNYGIALKYKFSVTDDFPGSCAACERSYGVCGYNGAYNSFICNCPDGINTTTDCLFPSSYNNGFRNGMDCMVDLSFGMVTGKSTLVASLLRMVLQDQSNESK	315

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal16g0588	315	Pfam	Wall-associated receptor kinase galacturonan-binding	27	87	IPR025287	GO:0030247
	Lal16g0588	315	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED	8	283	-	-
	Lal16g0588	315	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED	8	283	-	-
	Lal16g0588	315	Pfam	Wall-associated receptor kinase C-terminal	208	260	IPR032872	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal16g0588	30	224	Receptor kinase-like Gene Family	AT5G02070	27.273	3.51e-09	55.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal16g0588	-		-	gmx:100788392	487.263

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal16g0588	16	3818252	3819713	Lal16g0588	16	3818252	3819713	ECH