Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0585 ATGGGGGCTTGTGTGTCAACTCCAAAAGGGTGCATAGGAGGGAGGTCGAGTTCTAATTCCAAGAGGAAGACACGGAAGAGGAGGAATGGTGGACTCAGGAGAAGAGTGCCTTCAAGATTGTCTAAGGGATCATTGGACAAGGTTGATGTTCCTGCATTACCAGATTGTTCCTTTGTCAACCCTACTTTCCAAGCTGGAAGTACTGAGGAGTCATGGTTTGATTCATTTGCAGTATTCGACTCAGATTGTGATGATGATTATCAAAGTGTTCCTGAAGATGTAGTATCTCTTAATGGGATTGAAGGTGGATCCGTATCAAGTTTCCCATCTTCAAAAGATGCCAACCATAGAAGTTCAGATCTTCAACATTTTGGTGTAGATGTCAATGATACTCAAAGTAAATTTGATGGAAATGTAAATGAAGTAAATGAAGCAGTGTTCCTTGATGAGATTTCCTCAGTAGATGCTAGCTCAAACAAGGATGACAAAATTTTGGACAATTGTGGAATTCTTCCAAACAATTGTTTGTCATGTCTTGCATCTACAGTTCCATCTTTTGATAAAAGAAGATCATCAAGCTCTAGTCCTCCAAGTGCAAGGAAGAAGGCTCCTATGAAAATTTCCTTTAAACCAAAGGACGGACATGGGAATGGTACTCTATTTTCTTCCAGGACACTTCTACAAAGACCGGTTGCAGGTTCTCAGGTACCCTTTTGTCCAATCGATAAGAAAATGCTTGATTCTTGGTCACAGATTGATCCAAGCACTTTCAAAGTTCGAGGAGTAAATTATCTCAAGGACAAGAAAAAGGAGTTTGCTTCAAACTATTCTGCATATTACCCATTTGGTGTAGATGTATTCTTATCTCCAAGAAAAGTGGACCATATAGCTCGGTTTGTGGAACTCCCTCCTATTAGTTCCTCTAGGAAATTTCCACCTATACTCGTTGTAAATGTTCAGATTCCACTCTACCCTGCCACATTTTTTCAAGGTGAAACTGATGGGGAAGGAGTGAGCTTTGTTTTGTACTTTAAACTATCTGAAAGTTACAACAAGGAACTTCCATTGCATTTTCAAGAAAACATGACAAGATTGATGGATGATGAAGTTGAAAAGGTAAAGGGCTTTCCTGTAGATACAATTGTATCTTTCAGGGAGAGATTGAAAATATTAGGCCGTGTTGCCAACCTGGAAGATCTTAATTTGAGTGCAGCAGAAAGGAAGCTTATGCAGGCTTACAATGAGAAACCGGTTCTTTCGCGGCCCCAACATGAGTTTTACTCGGGAGAAAATTACTTTGAGATTGATTTGGATATGCATAGATTCAGTTATATCTCAAGAAAAGGTTTTGAGGCTTTCATGGATAGATTAAAGATGTGCACTCTAGATGTTGGACTCACAATTCAGGGGAACAAAGCAGAGGAGCTGCCAGAGCAAGTGTTATGTTGTATTAGATTAAATGGCATTGACTACATGAATTACCAGCAACTGGGGATAACTCAAGATCCCCTCTAA 1515 0.3974 MGACVSTPKGCIGGRSSSNSKRKTRKRRNGGLRRRVPSRLSKGSLDKVDVPALPDCSFVNPTFQAGSTEESWFDSFAVFDSDCDDDYQSVPEDVVSLNGIEGGSVSSFPSSKDANHRSSDLQHFGVDVNDTQSKFDGNVNEVNEAVFLDEISSVDASSNKDDKILDNCGILPNNCLSCLASTVPSFDKRRSSSSSPPSARKKAPMKISFKPKDGHGNGTLFSSRTLLQRPVAGSQVPFCPIDKKMLDSWSQIDPSTFKVRGVNYLKDKKKEFASNYSAYYPFGVDVFLSPRKVDHIARFVELPPISSSRKFPPILVVNVQIPLYPATFFQGETDGEGVSFVLYFKLSESYNKELPLHFQENMTRLMDDEVEKVKGFPVDTIVSFRERLKILGRVANLEDLNLSAAERKLMQAYNEKPVLSRPQHEFYSGENYFEIDLDMHRFSYISRKGFEAFMDRLKMCTLDVGLTIQGNKAEELPEQVLCCIRLNGIDYMNYQQLGITQDPL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0585 504 PANTHER PLANT/F14N23-31 PROTEIN 1 497 - -
Lal16g0585 504 MobiDBLite consensus disorder prediction 19 35 - -
Lal16g0585 504 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 249 490 IPR009769 -
Lal16g0585 504 PANTHER CW14 PROTEIN 1 497 - -
Lal16g0585 504 MobiDBLite consensus disorder prediction 186 206 - -
Lal16g0585 504 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0585 Lal-Chr16 3798167 3806892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0585 - - aprc:113869019 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0585 16 3798167 3806892 Lal16g0585 16 3798167 3806892 ECH
Lal16g0585 16 3798167 3806892 Lal15g0524 15 3645256 3649600 LSH
Lal16g0585 16 3798167 3806892 Lal23g1024 23 12047583 12057653 LSH