Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0577 ATGTCACTTCCCTCCTCCACTAACAGGCGCGTCTCTCTCGGCGGTTCCCCGCATCAACATGGTGGCGCGTCTGCTCACGACCTCCGGCAGCGCGTTATTGTCTGCCTTAATAAACTCTCCGACCGTGACACTCTTGCCGTAGCTACCGTGGAGCTTGAATCAATTGCTAAAACACTAACCCCAGACACTTTCTCTACTTTCATCTCTTGCATTCACAACACTGATTCCTCGTCCAGAATAACCGTGAGGAAACAGTGCATTCATTTGTTAACTGTTCTCTCGCACTTTCACACTGATGCTCTCGCACCGTTCCTCCCGAAGATGATCGCCGCCGTCATCCGTCGCCTCCGTGATAATGACAACGCCGTCCGATCTGCCTGTGTCGACGCCACGGCCGCTATGTCATCTCAGATCACGGCCCCTCCGTTCTCCGCCGCGTTCCTGAAGCCTCTCATGGACGCACTTACGCAGGAGCAGGACGCGAATTCTCAAAGCGGCGCCGCGCTGTGCCTCGCCGCGGCGGTTGACGCGGCGCCGAAACCAGACGTGGAGGCGTTGCGGCGGAGCACGCTTCCAAAGCTAGGGAAGTTTGCCAAGAGTGATGCTTGCAAGGCGAAGGCGGCGGTACTGGTGTTGATCTGTAGCTTAGTCGCCGCTGGTGGTGCAGCGAGCCGGGGAGTAATGAACTGGTTGGTGCCGTTCCTCATTGAGTTCCTGAGCAGTGAGGATTGGACAGTGAGAAAGGCCGCATCGGAGGCACTGGGAAAGGTGGCAATGGTGGAGAAATATTTGGCGTCACAGCACAAAGTTCTGTGCGTGGATTCATTGCAGAACCGTAGATTTGATAAGGTTAAAGTGGTGCGGGAGACTATGAATCGAGCATTGGAGATGTGGAAGGAGGTCACTGATGCATCTGAGGATGTTTCTGCTCCTGCTAAATCTGCTAGACCTTCGGCTGGCCCTGATGGTGGCAAAGATCAGTGTGTCACTAAAACTTCATCCTATATTGGCTCTAAACCTTGTCAGCCGAAGAAAACAGTCCCTGCCAGCCGGTCCCCTCCATCTGCAGTTTCAATTGTATCCTCCATCAAAGGAGAGGGTCGTCTTAAGGGTTATGACAAGGATTCAAGAGTGGGTATATTGCATAAGATGGATCATGAGAAATTCTCAGATGAGGAACTTGAAACTCCAGTATCAAAGTTCCCCTCTTCGAACATGTCTAGGGAAGATGATATTAAAACATGTGATTTTGAAGTTTCTAAGCCAGCCCTCATTCAAAATGGCATAAGTTCAAGGGCTGATGTAAAGCGTGTTCTCTTTAGCAAGATGTCTGATGAGAAAGTGCGAAAGTTTTGTGTTTCAAAATCTCGTGTCGTACCATGTTCTGATGATGACAATGACAATGCTGATGTTACAGTCAACCATGTAAATGAAGTTTGTGAGAGCCCACAAGATGTTGAGGATCTGTCTTTAATCCGTGAACAACTTACTCAAATTGAAAATCAGCAGTCCAATCTGTTAGACCTTCTTCAGAGATTTATTGGAAGCTCCCAAAGTGGGATGGATTCTCTAGAGACACGCGTAAATGGCCTTGAGACAGCCCTGGATGAAATATCATATGATTTGGCAGTATCAAGGGGCAGGATTCCCAACAGTGATGCCACAGAAGACACTTGTTGCAAGTTACCTGTTACTGACTTTTTGAGTTCTAAATTCTGGAAGAAAACAGAAGGTCGGTATTCCACATCAAGGTTCTCTTCAGGAAGCATAGCATCATCTAATGTTGTGCTTAAGGCTACCGACAAAGGTGGTAGCAAAGAAATGTTAACTACAAATAACAAAAGATTTCAGCATCGTAGCAGTGGAATTTTTGTGAACCCTTTGGCAGAAATTCAAAGTGATTTAAAGGGTCAATCATATAAGCCTAGAAATTTAGTCCAAGATGCTGAGAGAGCACGATGTAACAATGCCAGAAAATTTAATGGCATTTCACCAACTACTTATGAACTACCAAGGAACCAGAATACCAGCCAAACAGTTCATATATTTTCTCGTTGTGCATGTGGGAGAAAACCTATCCACGGGTTTGGGCATCAGTGCAGTGAAGACGGAATGTACTGTTTTATTGCAGCAAGCATCACAGAATCACTGGGTCGAGGATTTGTAGATGAAATCGTAAAAGTCAATATTCTTGCTTTTTCAGCAGCATTTGGACTCGGAAGTGATACTGGCGCAGGGCTTTTCTTGATGCCTGCCTGGCTTAAATGA 2268 0.4718 MSLPSSTNRRVSLGGSPHQHGGASAHDLRQRVIVCLNKLSDRDTLAVATVELESIAKTLTPDTFSTFISCIHNTDSSSRITVRKQCIHLLTVLSHFHTDALAPFLPKMIAAVIRRLRDNDNAVRSACVDATAAMSSQITAPPFSAAFLKPLMDALTQEQDANSQSGAALCLAAAVDAAPKPDVEALRRSTLPKLGKFAKSDACKAKAAVLVLICSLVAAGGAASRGVMNWLVPFLIEFLSSEDWTVRKAASEALGKVAMVEKYLASQHKVLCVDSLQNRRFDKVKVVRETMNRALEMWKEVTDASEDVSAPAKSARPSAGPDGGKDQCVTKTSSYIGSKPCQPKKTVPASRSPPSAVSIVSSIKGEGRLKGYDKDSRVGILHKMDHEKFSDEELETPVSKFPSSNMSREDDIKTCDFEVSKPALIQNGISSRADVKRVLFSKMSDEKVRKFCVSKSRVVPCSDDDNDNADVTVNHVNEVCESPQDVEDLSLIREQLTQIENQQSNLLDLLQRFIGSSQSGMDSLETRVNGLETALDEISYDLAVSRGRIPNSDATEDTCCKLPVTDFLSSKFWKKTEGRYSTSRFSSGSIASSNVVLKATDKGGSKEMLTTNNKRFQHRSSGIFVNPLAEIQSDLKGQSYKPRNLVQDAERARCNNARKFNGISPTTYELPRNQNTSQTVHIFSRCACGRKPIHGFGHQCSEDGMYCFIAASITESLGRGFVDEIVKVNILAFSAAFGLGSDTGAGLFLMPAWLK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0577 755 MobiDBLite consensus disorder prediction 1 25 - -
Lal16g0577 755 Pfam HEAT repeat 231 258 IPR000357 GO:0005515
Lal16g0577 755 SUPERFAMILY ARM repeat 32 295 IPR016024 -
Lal16g0577 755 Coils Coil 492 512 - -
Lal16g0577 755 ProSiteProfiles HEAT repeat profile. 231 260 IPR021133 -
Lal16g0577 755 Gene3D - 23 343 IPR011989 -
Lal16g0577 755 MobiDBLite consensus disorder prediction 306 355 - -
Lal16g0577 755 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 12 666 - -
Lal16g0577 755 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 12 666 IPR033337 GO:0005874|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0577 Lal-Chr16 3752716 3757341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0577 - - mtr:MTR_5g036950 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0577 16 3752716 3757341 Lal16g0577 16 3752716 3757341 ECH