Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0562 ATGGGAAATTGTCAAGCTGTTGATGCTGCAGTTCTTGTGATCCAGCACCCTTGTGGGAAGATAGATAGGTTGTATTGGCCAGTCATTGCAAGTGAAGTAATGAAGACCAATCCAGGTCACTATGTGTCTTTGATTATACCATTGCCTGTGTCACAACAACAACAACAACAACAAGAACACAAGAACCAAGAGCAGAAGACAGTGCGTTTTACCCGTGTTAAGCTGCTCAGGCCTAATGAGACTCTAAATCTCGGTCATGCTTACAGGCTTGTTACTACACAAGAGGTTATGAAGGTCTTGAAAGGAAAGAAGCATGCAAAAACAAGGAAACCACAAACAGAGACAGTTGAGAAGCCACAAACAGAAACAGATGAGAAGCCACAAGCAGTTAAGCAAGAAAAGCATAGTTCTGATAGTGAGACTCAGACAGGAGGAGAGTCTGATAGAGGAAAGACATATCAGGCAGTGAGAGCTGGGAGAAACAGGCCAAGGACAGGTTCAGTAAATCTGGCTATGCTGGGGTCAAAATCGTGGCGCCCCTCCTTACAGAGCATTTCAGAGTCAGCTAGTTGA 573 0.445 MGNCQAVDAAVLVIQHPCGKIDRLYWPVIASEVMKTNPGHYVSLIIPLPVSQQQQQQQEHKNQEQKTVRFTRVKLLRPNETLNLGHAYRLVTTQEVMKVLKGKKHAKTRKPQTETVEKPQTETDEKPQAVKQEKHSSDSETQTGGESDRGKTYQAVRAGRNRPRTGSVNLAMLGSKSWRPSLQSISESAS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0562 190 Pfam PADRE domain 1 187 IPR025322 -
Lal16g0562 190 MobiDBLite consensus disorder prediction 168 190 - -
Lal16g0562 190 MobiDBLite consensus disorder prediction 101 190 - -
Lal16g0562 190 MobiDBLite consensus disorder prediction 109 145 - -
Lal16g0562 190 PANTHER EXPRESSED PROTEIN 1 189 - -
Lal16g0562 190 PANTHER D-RIBOSE-BINDING PERIPLASMIC PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0562 Lal-Chr16 3610814 3615495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0562 - - gmx:100777177 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0562 16 3610814 3615495 Lal16g0562 16 3610814 3615495 ECH
Lal16g0562 16 3610814 3615495 Lal15g0504 15 3486157 3487697 LSH