Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0553 ATGCCAATCCGTGGAAAGCTTGAGGGAGGCTTTGAGGCCAAGTCTAGTGCAGACATGTTCTGGGGAGCTCTTAGGAACTGGTACACATTGTTCCCTAAAGCCTTCACCAGTGTTTACAAAGCCGTTGAGGTTGTTGAGGGTGATGGCAAGGCTGTTGGTTCTGTCTTTCATGTATCAATTAGTGAAGATTCGCCATTTGCAAAATCAGTTAGAGAGAAGATAGAGGCAGTTGATGATGCAAAGAGGACATTAATAATGGATGTGGCTGGAATTGATGAGAACGTGTTTAAAATCTACAAAAAATATGTGTTACACGTTAGTGTAACACCTAAGGGTAATGGAAGCGAAGTGAAAGTCGCAGTTGAGTATGAAAATCCCACCGAAAATGATCCTGTGCCAACTGAGTTTATAGATGTAGAAGTTCAGGGCTTCAAAGATTTGGATGCCTATCTTCAAAACAAATAG 465 0.4172 MPIRGKLEGGFEAKSSADMFWGALRNWYTLFPKAFTSVYKAVEVVEGDGKAVGSVFHVSISEDSPFAKSVREKIEAVDDAKRTLIMDVAGIDENVFKIYKKYVLHVSVTPKGNGSEVKVAVEYENPTENDPVPTEFIDVEVQGFKDLDAYLQNK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0553 154 SMART Bet_v_1_2 2 154 IPR000916 GO:0006952
Lal16g0553 154 CDD Bet_v1-like 5 152 - -
Lal16g0553 154 PANTHER MLP-LIKE PROTEIN 423 6 152 - -
Lal16g0553 154 Pfam Pathogenesis-related protein Bet v 1 family 5 153 IPR000916 GO:0006952
Lal16g0553 154 Gene3D - 1 152 IPR023393 -
Lal16g0553 154 PANTHER MLP-LIKE PROTEIN 423 6 152 - -
Lal16g0553 154 SUPERFAMILY Bet v1-like 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0553 Lal-Chr16 3572787 3573665 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0553 - - lang:109349212 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0553 16 3572787 3573665 Lal16g0553 16 3572787 3573665 ECH