Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0542 ATGGCAGGTTCGAATGAAGGATTGAGGAAGCCAGTGTTTACTAAGGTTAATCAGCTTCGCCCCGGGACTAACGGACACACTTTAACTGTTAAGGTTGTTAATGCTAAGACGGTGATGCAGAGAGGTCGTCCTGATGCTCCTCAATCCCGTCAAATACGACTTGCTGAATGTTTGGTTGGTGATGAGACTGGAATCATCGTATTCACTGCGAGAAATGGTCAAGTGGACTTGGTGAAAGATGGCGCTACTGTCATCCTGCGCAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTTGCTGTGGACAAGTGGGGTCGTGTTGAAGTCGCCGAACCTGCTAGTTTCACTGTCAAGGAAGACAATAACTTGTCCCTGATTGAGTATGAACTAGTGAATGTTGTGGAATGA 411 0.4599 MAGSNEGLRKPVFTKVNQLRPGTNGHTLTVKVVNAKTVMQRGRPDAPQSRQIRLAECLVGDETGIIVFTARNGQVDLVKDGATVILRNAKIDMFKGSMRLAVDKWGRVEVAEPASFTVKEDNNLSLIEYELVNVVE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0542 136 Gene3D - 23 126 IPR012340 -
Lal16g0542 136 PANTHER OS05G0244600 PROTEIN 5 136 - -
Lal16g0542 136 PANTHER - 5 136 - -
Lal16g0542 136 CDD SoSSB_OBF 27 110 - -
Lal16g0542 136 SUPERFAMILY Nucleic acid-binding proteins 6 134 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0542 Lal-Chr16 3471542 3474434 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0542 - - gmx:100499877 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0542 16 3471542 3474434 Lal16g0542 16 3471542 3474434 ECH