Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0536 ATGAGTGGCTTGAGCATGAGTGGTTTTACATACATGTTTCTCATTGCATATCTTATTTGGTGTTCAAATTTTGAGTCTTGCATTGCTAGAAGAAGCAAGCATTGGAGGCACAGCAGAACTGTCTCAGGTTCTGAGTTTAAGAAGAAAGGAAAGAGTTATTATAGTAATAGTCACAATCATCATGGTGGAGGATCAAAACCAAAGCCTCCATCAAATAAAAGTAGTAGTACTCCTACACTACCAAAGGCTCCACCATATAAAAGCACTACTCCTTCATCACCACCAATTCCTAAGCCAAAAGTGGGTACTCCCCCACCAAATGCTTATAATGCCGCCCATTCTACCATCTTTAATGTGTTAGATTTTGGTGCTAAGGGTGATGGAAGTACTGATGATACAAAGGCATTCCAAGCCACATGGGTAGCTGCTTGCAATGTAGAGGCATCAACCATGCTAGTCCCAGCAGATTATGTCTTCTACGTGGGACCTATTTCATTCTGTGGCCCATACTGTAAACCCAACATTGTTTTTCAGCTTGATGGTACCATTGTTGCACCAACCAACTCCAATGCTTGGGGTGGAGGATTGCTACAATGGCTGGAATTTACAAAGCTGGTGGGAATTACCATTCAAGGAAATGGGGTCATTGATGGAAGAGGCTCGGTCTGGTGGCAAGATCAACCATTTGATGAGCCTATAGATGATGAAGAAAAGCTTATCGTCCTTTTAAACCACACAAGGAAAACACCAGTACCGATACAAAGCGAGATGGGAAGAAAAATGCCTAGCATCAAGCCAACTGCACTAAGGTTTTATGGGAGCTTTAATACAACAGTCACAGGCATAACAATTCAAAATAGTCCTCAATGTCACCTCAAATTTGATAGCTGCAATGGGATCCTGGTCCATGATGTGAGCATATCATCTCCTGGTGACAGCCCTAACACAGATGGAATTCACCTTCAGAATTCTAAAGATGTATTGATTCACAGCAGCAAATTAGCATGTGGAGATGACTGTATTTCAATACAAACAGGATGCTCAAATGTATATGTACATAATATCAACTGTGGGCCAGGACATGGAATCAGCATTGGAAGTTTAGGAAAGGATAACACTAGAGCATGTGTCTCAAACATTACTGTCAAAGACGTCAACATGCACAACACAATGAATGGGGTTAGAATCAAAACATGGCAGGGAGGATCAGGGTCAGTGCAGGGAATACTATTCTCAAACATACAAGTATCTGAAGTTCAACTCCCGATCGTGATCGACCAATTCTATTGTGATAAAAGAACATGCAAAAACCAATCATCAGCTGTGTCTCTTGAAGGAATCAACTATGAAAGAATAAGAGGGACATACACAGTAAAGCCAGTGCACTTTGCATGCAGTGAGTACTCTCCATGTGTAGATGTTTCTCTAACATCAGTAGAGTTAAAACCAGTTCAAGAACAATACCACCTATATGATCCATTCTGCTGGCACACTTATGGTGAATTAAGAACTCCCACTGTTCCACCAATTCCTTGCCTTCAGATTGGGAAGCCTTCAAGCAACAGAATTCAGACTGATCATGATTTCTATCTGTCTTTGTCGTGTGGGTTAGCTGGGATTTGCAGGTGGCCTGTTGCGATTGGTAGATGCTTGGTTTGCTGGCGGCATGACATTATAGTGTTGGCGGCTTGTCAGGTGGGATGTCTGGAAAGTGGTCCCATAACCGCCCAAGGCATCAGATTAATGACGAAGCATTTGGTTAAGCCATTTGTTCGAACATTTAACCGCTTCTTTTCTCCTAGTATTCTACGATCACGATCGACGAACCCTAATTCCAACTCCAATAGAAAGAATAAACAAGTTCACATGACCAGTAACGAGTTTCGCTTCTTCTTGTCCTGCGATATCAACCTTCCCGTTACCTTCCGCATCGATCGTCTCGAAGGCAATTTATCCCTTCCCAACAGTTTCCCTAATTCAGAAAATAATGTCTCCAGTGAGAGTGGAATGGCAGAGTTATATGTTGAGTGTGCGTTGTACATTGATGGTGCACCATTTGGCCTTCCCACCAGAACAAGGTTGAAGTCCACAGGACTATCATATTGTTGGAGTGAGCTCATCACATTGACAACTAAGTATCGAGACTTAACTGCCCAGTCACAACTCACTTTCACTGTTTGGGATGTTTCACATGGTGAGAGATTGATTGGAGGAGCCACAATTCTTCTCTTTAACAACAAAAAGCAGCTTAAAACTGGGAAGCAAAAGCTCAGGCTTTGGGCAGGAAAAGAGGCAGATGGAAATTTTCCTACTAGTACACCTGGAAAGGTCCCTAGGCATGAGCGCGGGGAGTTGGAGCGGTTGGAAAAGCTTGTGAATAAGTATGAACAAGGTCAGATTCAACGTGTGGACTGGCTGGATCGCCTCACATTTAAAACTTTGGAGAGAATCAAGGAACGTGAAAGTTTGAAAAATGGAACTTCTCACTTGTACCTGGTTGTAGACTTCTGTAGTTTTGAGCATCGAGTTGTTTTTCAGGAATCAGGTCTGTTCCCATCTCCTATAGCTTCAACCAATGATATTGTTATTGTCTGGGACCCAGAAGTAGGAAAGATAAATCCTTCTGAACACAAACAATTAAAGCTGGCCAGGAGTTTGACCCGTGGTGTCATTGACAGAGATCTGAAGCCAAGCTCAAATGAAAGAAAGTCCATTCAGAGAATACTAAAATATCCACCAACTAGGACTTTAAGTGGAGATGAGAGGCAGCTTTTGTGGAAATTTCGCTTTTCTTTGATGTCTGAAAAGAGGGCTCTCACAAAGTTCCTTCGTTGTGTTGAATGGAGTGATGTTCAGGAAGCAAAACAAGCACTAGAATTAATGGGCAAGTGGGAAATGATTGACGTCTGTGATGCACTGGAACTTTTATCTCCTGTTTTTGAAAGTGAAGAGGTCCGTGCTTATGCTGTTAGTGTCCTTGAAAGAGCTGATGATGAAGAGCTTCAATGTTACTTGCTTCAACTGGTTCAGGCTCTTCGGTTTGAGCGCTCTGACAAATCTCGCCTTTCTCATTTTCTTTTCCAGCGTGCATTATGCAATATTGAATTGGCAAGCTTTCTTCGCTGGTACGTGGCTGTTGAACTTTATGACCCTGCATATGCCAAACGTTTTTATTGCACTTATGAGATTCTGGAGGAGAATATGATGAAGATGGCAGCTGGTGTGAATGGAGAGGATGATGGTTTTAAACTATGGCAGAGTTTAGTACGTCAGACAGAATTGACTGCTCAATTGTGTTCAATATCAAGAGATGTAAGGAATGTTCGTGGTAATACACAGAAGAAGATTGAAAAGCTTAGACAACTGCTTTCTGGTCTTCTTAGCGAGCTTACCTATTTTGATGAGCCCATACGATCACCTCTGGCACCAGGTGTCCTTATCACTGGGATTGTACCCTCAGAGTCATCAATATTTAAAAGTGCATTGCATCCTTTGCGTCTTACTTTTAGAACAGAAGATGGTGGAACTTGTAAGATCATATTTAAAAAGGGTGATGATCTTCGGCAGGACCAGTTGGTTGTTCAAATGGTGTCACTTATGGATCGGTTGCTTAAGTTAGAAAACCTTGATCTGCACTTAACACCATACAAGGTGCTAGCAACTGGGCAAGATGAAGGCATGGTTGAATTCATTCCATCCCACTCATTAGCACAGATTCTATCAGAGCACCGCAGCATCATAAGCTATTTGCAGAAGTTCCATCCTGATGACCATGGACCTTTCGGAATTACCGCTATTTGTCTTGAAACATTTATAAAAAGTTGTGCTGGGTATTCTGTTATCACATATATACTTGGTATTGGAGACAGGCACTTAGACAACCTCCTCCTTAGAGACGATGGACGTCTTTTCCATGTCGACTTTGGTTTCATTCTTGGGCGAGATCCTAAGCCATTTCCACCTCCAATGAAGCTTTGCATGGAAATGGTCGAAGCTATGGGTGGAGCCGAAAGCCAGTATTACACAAGGTTTAAGTCCTACTGCTGTGAAGCATACAACATTCTTCGGAAATCTAGTAACTTAATTTTAAATCTATTTTACTTAATGGCGGGGTCCAATATTCCCGACATAGCTTCTGATCCTGAAAAGGGAATTCTTAAGCTTCAAGAAAAGTTTCGGTTGGACTTGGACGATGAAGCCAGTATACATTTCTTCCAGGATCTGATTAATGAGAGTGTGAGTGCATTATTCCCTCAGATGGTTGAGACCATTCATCGCTGGGCTCAGTATTGGCGGTTCCTCATTTCGCGTTCCTTCAAAGCACCGTTCACATCTCTCTCTCTCTGCATCTTGCATTCAAATATCAGATCCGTGATCTACATATCATTTCCAAAGGGTGAAGGAAAAATGGGTCTCACATTCACGAAGCTTTTCAGTCGGCTTTTCGCGAAGAAGGAAATGCGAATTCTGATGGTGGGTCTTGACGCTGCTGGTAAGACCACTATCCTGTACAAGCTCAAGCTTGGAGAGATCGTCACTACTATTCCAACCATCGGGTTCAATGTGGAGACTGTGGAATACAAGAACATTAGCTTCACTGTTTGGGATGTTGGAGGCCAGGACAAGATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACTCAAGGTCTTATATTTGTCGTTGATAGCAATGACAGGGACAGAGTTGTTGAGGCCAGAGATGAGTTACATAGGATGTTGAACGAGGATGAACTGAGAGATGCTGTATTGCTTGTGTTTGCTAACAAACAAGATCTTCCTAATGCCATGAATGCTGCTGAGATTACTGATAAGCTGGGTCTCCACTCCCTCAGACAGCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGGGAAGGTCTTTATGAAGGCTTAATGCTTTTTGGGAGTCTTGTGGGTCGGCAATTCTGGATGCGGGGGTGA 4965 0.4276 MSGLSMSGFTYMFLIAYLIWCSNFESCIARRSKHWRHSRTVSGSEFKKKGKSYYSNSHNHHGGGSKPKPPSNKSSSTPTLPKAPPYKSTTPSSPPIPKPKVGTPPPNAYNAAHSTIFNVLDFGAKGDGSTDDTKAFQATWVAACNVEASTMLVPADYVFYVGPISFCGPYCKPNIVFQLDGTIVAPTNSNAWGGGLLQWLEFTKLVGITIQGNGVIDGRGSVWWQDQPFDEPIDDEEKLIVLLNHTRKTPVPIQSEMGRKMPSIKPTALRFYGSFNTTVTGITIQNSPQCHLKFDSCNGILVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNINCGPGHGISIGSLGKDNTRACVSNITVKDVNMHNTMNGVRIKTWQGGSGSVQGILFSNIQVSEVQLPIVIDQFYCDKRTCKNQSSAVSLEGINYERIRGTYTVKPVHFACSEYSPCVDVSLTSVELKPVQEQYHLYDPFCWHTYGELRTPTVPPIPCLQIGKPSSNRIQTDHDFYLSLSCGLAGICRWPVAIGRCLVCWRHDIIVLAACQVGCLESGPITAQGIRLMTKHLVKPFVRTFNRFFSPSILRSRSTNPNSNSNRKNKQVHMTSNEFRFFLSCDINLPVTFRIDRLEGNLSLPNSFPNSENNVSSESGMAELYVECALYIDGAPFGLPTRTRLKSTGLSYCWSELITLTTKYRDLTAQSQLTFTVWDVSHGERLIGGATILLFNNKKQLKTGKQKLRLWAGKEADGNFPTSTPGKVPRHERGELERLEKLVNKYEQGQIQRVDWLDRLTFKTLERIKERESLKNGTSHLYLVVDFCSFEHRVVFQESGLFPSPIASTNDIVIVWDPEVGKINPSEHKQLKLARSLTRGVIDRDLKPSSNERKSIQRILKYPPTRTLSGDERQLLWKFRFSLMSEKRALTKFLRCVEWSDVQEAKQALELMGKWEMIDVCDALELLSPVFESEEVRAYAVSVLERADDEELQCYLLQLVQALRFERSDKSRLSHFLFQRALCNIELASFLRWYVAVELYDPAYAKRFYCTYEILEENMMKMAAGVNGEDDGFKLWQSLVRQTELTAQLCSISRDVRNVRGNTQKKIEKLRQLLSGLLSELTYFDEPIRSPLAPGVLITGIVPSESSIFKSALHPLRLTFRTEDGGTCKIIFKKGDDLRQDQLVVQMVSLMDRLLKLENLDLHLTPYKVLATGQDEGMVEFIPSHSLAQILSEHRSIISYLQKFHPDDHGPFGITAICLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVDFGFILGRDPKPFPPPMKLCMEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEASIHFFQDLINESVSALFPQMVETIHRWAQYWRFLISRSFKAPFTSLSLCILHSNIRSVIYISFPKGEGKMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLMLFGSLVGRQFWMRG 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0536 1654 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1151 1417 IPR000403 -
Lal16g0536 1654 SMART pi3k_hr1_6 1178 1430 IPR000403 -
Lal16g0536 1654 CDD PI3Kc_III 1085 1429 - -
Lal16g0536 1654 TIGRFAM small_GTP: small GTP-binding protein domain 1485 1617 IPR005225 GO:0005525
Lal16g0536 1654 SMART rab_sub_5 1487 1620 - -
Lal16g0536 1654 SMART pbh1 406 427 IPR006626 -
Lal16g0536 1654 SMART pbh1 324 345 IPR006626 -
Lal16g0536 1654 SMART pbh1 205 226 IPR006626 -
Lal16g0536 1654 SMART pbh1 377 398 IPR006626 -
Lal16g0536 1654 SMART pbh1 297 323 IPR006626 -
Lal16g0536 1654 SMART pbh1 347 367 IPR006626 -
Lal16g0536 1654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1483 1639 IPR027417 -
Lal16g0536 1654 SMART pi3k_hr2_4 892 1077 IPR001263 -
Lal16g0536 1654 Gene3D - 857 1066 IPR042236 -
Lal16g0536 1654 Gene3D - 1233 1433 IPR036940 GO:0016301
Lal16g0536 1654 SUPERFAMILY Pectin lyase-like 111 530 IPR011050 -
Lal16g0536 1654 Pfam Phosphoinositide 3-kinase C2 672 811 IPR002420 -
Lal16g0536 1654 ProSiteProfiles small GTPase Arf family profile. 1480 1654 - -
Lal16g0536 1654 MobiDBLite consensus disorder prediction 56 83 - -
Lal16g0536 1654 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 894 1070 IPR001263 -
Lal16g0536 1654 MobiDBLite consensus disorder prediction 84 104 - -
Lal16g0536 1654 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1181 1195 IPR018936 GO:0016301
Lal16g0536 1654 SMART pi3k_hr3_6 642 744 IPR002420 -
Lal16g0536 1654 PRINTS GTP-binding SAR1 protein signature 1488 1511 IPR006689 GO:0003924|GO:0005525
Lal16g0536 1654 PRINTS GTP-binding SAR1 protein signature 1516 1540 IPR006689 GO:0003924|GO:0005525
Lal16g0536 1654 PRINTS GTP-binding SAR1 protein signature 1543 1568 IPR006689 GO:0003924|GO:0005525
Lal16g0536 1654 PRINTS GTP-binding SAR1 protein signature 1588 1609 IPR006689 GO:0003924|GO:0005525
Lal16g0536 1654 PANTHER PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3 644 1427 - -
Lal16g0536 1654 Gene3D - 1474 1649 IPR027417 -
Lal16g0536 1654 ProSitePatterns Polygalacturonase active site. 354 367 IPR000743 GO:0004650|GO:0005975
Lal16g0536 1654 MobiDBLite consensus disorder prediction 38 107 - -
Lal16g0536 1654 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 1274 1294 IPR018936 GO:0016301
Lal16g0536 1654 SUPERFAMILY ARM repeat 876 1065 IPR016024 -
Lal16g0536 1654 CDD C2_PI3K_class_III 626 799 - -
Lal16g0536 1654 CDD Arf1_5_like 1487 1639 IPR045872 GO:0003924
Lal16g0536 1654 PANTHER PHOSPHATIDYLINOSITOL KINASE 644 1427 IPR015433 GO:0046854|GO:0048015
Lal16g0536 1654 SUPERFAMILY Protein kinase-like (PK-like) 1084 1424 IPR011009 -
Lal16g0536 1654 SMART sar_sub_1 1470 1646 IPR006689 GO:0003924|GO:0005525
Lal16g0536 1654 Gene3D - 102 519 IPR012334 -
Lal16g0536 1654 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 672 778 IPR035892 -
Lal16g0536 1654 ProSiteProfiles C2 phosphatidylinositol 3-kinase (PI3K)-type domain profile. 647 801 IPR002420 -
Lal16g0536 1654 Pfam Phosphatidylinositol 3- and 4-kinase 1178 1378 IPR000403 -
Lal16g0536 1654 SMART arf_sub_2 1470 1650 - -
Lal16g0536 1654 Pfam ADP-ribosylation factor family 1474 1639 IPR006689 GO:0003924|GO:0005525
Lal16g0536 1654 Gene3D C2 domain 635 785 IPR035892 -
Lal16g0536 1654 ProSiteProfiles PIK helical domain profile. 892 1067 IPR001263 -
Lal16g0536 1654 CDD PI3Ka_III 892 1050 - -
Lal16g0536 1654 Gene3D - 1082 1231 - -
Lal16g0536 1654 Pfam Glycosyl hydrolases family 28 146 228 IPR000743 GO:0004650|GO:0005975
Lal16g0536 1654 Pfam Glycosyl hydrolases family 28 263 482 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0536 Lal-Chr16 3427162 3448406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0536 623 1432 Acyl Lipid Metabolism Gene Families AT1G60490 83.456 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0536 K00914 - gmx:547983 1506.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0536 16 3427162 3448406 Lal16g0536 16 3427162 3448406 ECH