Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0531 ATGCATGTCATATATTATGATGATATCTTTGCTAATAAAGACTTGAAACTCATGGCCTTCCTAACAATAGCAGGATCCTCAAACAATACTTGGCAACCCACAATGGGAGCAAATACTACAACCCCAAGTTATTGGTTGAATTGGAGGTTCTTCATCTGTGCAATATTTGTTTTGATTGCTATGGTTCTAGCATCATTTTTGATATGGAAATATGAAGAATTCAATAAGCCGAGAAGTGAGAGGAGGAGAAGAAGGCAGCAAGAAACAGCTGGTTCGCTATATAAGGATGAAGCATGGAATACATGCGTCAAAGGAATTCATCCTGCCTGGCTCCTTTCCTACAGAACAATCTCTTTTCTTGTGCTATTGTCTTTGCTCATTGCAAATGTGGTTTCTGAAGGAGGTGGCATATTTTACTTCTACACTCAGTGGACCTTTACCTTGGTCACAATTTACTTCGGGCTTGGATGTTGTTTCTCCATATATGGGTATTACTTTAACAAGAATTCGTGTTGCAGCAACTTGATCGATCATGCTTCTTTAGCTGCAGAACAGGGCACATATGTGGCGCCTACACTAGATGCCACTGCAGATGTGTCTAACCTGTACAAGAGTACAGGCGCCTATCAGGAACCTCACACTCGGGATGCAGCTGATGCATGGGGTTATATTTTTCAAATAATTTTTCAGACTTGTGCAGGTGCTGTAGTCCTCACTGACTGTGTATTTTGGCTCATTATTTATCCATTTCTGATGGCCAAAGATTTCAGTCTGGATTTTGTAAGTATTGCTAATCTTGGCCTTGGTTTGTCCCTTACTACCCCTTTGGCTGGGAAGCTATACCTATTGGTTGTTTGTATGCACTCCATAAACGCTCTTTTCCTCCTCGGTGACACAACATTGAATTGCATGAGATTTCCAATGTTTCGATTTGCATATTTTGTCCTCTGGACGACTATATTTGTGGTATTCCAGTGGATCATACATATGTGGCCTTATACTTTCCTTGATTTGGCATCTCCATATGCACCCTTATGGTACTTAGCTGTGGGAGTTCTGCATATTCCATGCTATGGAATCTTTGCTTTAATAGTGAGGTTGAAGCACTTGTGGCTGTCAAAAGCATTTCCAGGGTCCTGTCAGTTTGTGAAGACCAAACTTGTGAAAGTTGAAACATTGGTACCAGAACCAGATATAGGAATAGGAGGAGAAATGGCTCGCAAGAAGATCAGAGAGTACGACTCCAAGAGATTGTTGAAGGAGCATTACAAGAGACTTTCTGGGAATGACTTGCCCATCAAGTCTGCACAAGTTACAGAGTCCACTGATCTCACTGAGCTACAAGAGAAGGAACCTTGGCTTTCCTCTTCTAAGTTGGTTGTGAAACCAGACATGTTATTTGGAAAGCGTGGCAAAAGTGGATTGGTTGCCTTAAACTTGGATTTGGCACAAGTTGCTTCATTTGTGAAAGAGCGCCTGGGAAATGAGGTTGAAATGAGTGGATGCAAAGGACCTATAACAACTTTCATTGTTGAACCTTTCATCCCACACAATGAAGAGTTTTACCTCAACATTGTCTCTGACAGACTTGGAAACAGCATAAGCTTTTCAGAATGTGGAGGAATCGAAATTGAAGAGAACTGGGATAAGGTTAAGACTGTATTTGTCCCAACAGGAGTGTCTCTCACATCAGAAATTATTGCCCCACTTGTTGCAACTCTTCCCTTGGAGATCAAGGGAGAAATTGAGGTGTTTCTCAATGTGATTTTCAATATATTTCAAGACCTGGATTTCACTTTCTTAGAGATGAATCCTTTCACATTGGTCGATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGTTAGATGACACCGCTGCTTTCAAGAACTTCAAGAAATGGGGAAACATTGAATTTCCATTGCCATTTGGAAGGGTTATGAGCCCCACTGAATCTTTCATTCATGGATTAGATGAAAAGACAAGTGCGTCTTTAAAATTTACAGTGTTGAACCCAAAGGGCCGAATTTGGACAATGGTAGCTGGGGGAGGTGCAAGTGTCATCTATGCTGACACTGTAGGTGATCTTGGCTTTGCAAATGAACTTGGAAACTATGCAGAATACAGCGGCGCACCCAAAGAAGACGAGGTCCTACAGTATGCCAGAGTTGTTATTGATTGTGCAACTGCAAATCCGGATGGCCAAAAGAGAGCTCTTGTGATTGGAGGAGGCATAGCTAACTTTACTGATGTTGCTGCTACATTTAGTGGCATAATTCGAGCACTGAAAGAGAAGGAGTCCAAGTTAAAAGCAGCAAGGATGCACATTTATGTGAGGAGAGGAGGTCCAAACTACCAGAAGGGTCTAGCACAAATGCGAGCACTTGGAGAGGATATCGGCATCCCCATTGAGGTTTATGGACCAGAAGCAACAATGACTGGTATATGCAAAGAGGCAATACAGTGCATCACTGCTTCCGCTTAA 2484 0.4203 MHVIYYDDIFANKDLKLMAFLTIAGSSNNTWQPTMGANTTTPSYWLNWRFFICAIFVLIAMVLASFLIWKYEEFNKPRSERRRRRQQETAGSLYKDEAWNTCVKGIHPAWLLSYRTISFLVLLSLLIANVVSEGGGIFYFYTQWTFTLVTIYFGLGCCFSIYGYYFNKNSCCSNLIDHASLAAEQGTYVAPTLDATADVSNLYKSTGAYQEPHTRDAADAWGYIFQIIFQTCAGAVVLTDCVFWLIIYPFLMAKDFSLDFVSIANLGLGLSLTTPLAGKLYLLVVCMHSINALFLLGDTTLNCMRFPMFRFAYFVLWTTIFVVFQWIIHMWPYTFLDLASPYAPLWYLAVGVLHIPCYGIFALIVRLKHLWLSKAFPGSCQFVKTKLVKVETLVPEPDIGIGGEMARKKIREYDSKRLLKEHYKRLSGNDLPIKSAQVTESTDLTELQEKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGNEVEMSGCKGPITTFIVEPFIPHNEEFYLNIVSDRLGNSISFSECGGIEIEENWDKVKTVFVPTGVSLTSEIIAPLVATLPLEIKGEIEVFLNVIFNIFQDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGFANELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQKRALVIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIYVRRGGPNYQKGLAQMRALGEDIGIPIEVYGPEATMTGICKEAIQCITASA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0531 827 Pfam ATP-grasp domain 410 607 IPR013650 -
Lal16g0531 827 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 405 827 - -
Lal16g0531 827 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 408 640 - -
Lal16g0531 827 PANTHER ATP-CITRATE SYNTHASE 405 827 - -
Lal16g0531 827 Pfam ATP citrate lyase citrate-binding 645 821 IPR032263 -
Lal16g0531 827 SUPERFAMILY Succinyl-CoA synthetase domains 661 807 IPR016102 -
Lal16g0531 827 Gene3D - 405 637 - -
Lal16g0531 827 Gene3D - 644 826 IPR016102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0531 Lal-Chr16 3390144 3401864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0531 405 827 Acyl Lipid Metabolism Gene Families AT1G10670 89.125 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0531 K01648 - gmx:100818180 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0531 16 3390144 3401864 Lal16g0531 16 3390144 3401864 ECH
Lal16g0531 16 3390144 3401864 Lal14g1514 14 15978361 15980933 ECH
Lal16g0531 16 3390144 3401864 Lal17g0908 17 7038479 7042732 ECH
Lal16g0531 16 3390144 3401864 Lal4g1146 4 14890781 14896139 ECH
Lal16g0531 16 3390144 3401864 Lal15g0479 15 3277625 3282523 LSH