Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0530 ATGGAAGTAAGAGATTTTCAAGAAACCCCATTCCATGGAGACATATTAGAGGCCATTTTCTCACACGTGCCACTCGTTCACCTTTTAGCTGCTTCTCACGCGTCAAAGTCCTGGAAGCGTGCGGTGTTCTCCTCCCTCTCCCACGTTAATCCAATCAAGCCATGGCTCATTATCCTCACTCAGTGCCCACGCGCCCCACACCTGATCACAACTCACGCGTATGACCCTCGCTCGCACGTGTGGCTGGAGATTAAACAAAAACCGTCGATGCCAATAAAGCATGCCTCCGCCGTTCGATCATCTCACTCCACTTTCCTCTACACTCTCTCCCCCGCCGAGTTCGCATTCTCCCTCGACCCCCTCCATCTCAAATGGCACCACGCGCCGCCACCAACCGTGTGGCGCACGGACCCCATCGTTGCGTGCGTGGGGAATCATATAGTAATAGCAGGCGGTGCGTGTGACTTCGAGGATGACCCGCTCGCGGTGGAGACATACGACACAGTGAAAAACGCGTGGGTCACGTGTCAGTCCATGCCTGAGCTGCTCAAGGGCTCAACAGCATCAACGTGGCTTTCCGTCGCAGTCGTCGGAGACACCATGTACCTGACGGAGAAATATTCCGGCATGACATACACTTTCAATCCCATTGCTAATCTCTGGAACGGACCGTTCGATATGAGACCCGATCAGAACGTGATGTTCTGTGTCACCGGAACCCTAAGGAAGCGATTGGCGGTGGCAGGAGTTGTGGGGGAAGGGGAGAACATGAAGGGGGTGAAGATTTGGGTAGTGAAGGGAGAATTAGGTTCGGGAATGGGGATGGAGGAGTTAGGTGAGATGCCGAAGGAGATGGTGGAGAAGATAATGGGAGGTTCGGAGTTTGGTTTGGGTTCGGTTGTGGTGACTTGGGTTGGGGATTTTGTGTACGTGTGGAACTCGATTAATTGGAAGGAGGTGATGATGTGTGAGGTTGTGAATGGTAGCACGTGCGAGTGGAAGAGTGTGAATAACGTTGCTGTGAACGAGAGGACACGGATGAAGAGGGTGGTGTTAAGTAGTGCTGATGTGTGCTTCGAGAATCTTCGAAGGGAAGTGGGAATTTGCATGACAGTAGTGTGA 1122 0.5267 MEVRDFQETPFHGDILEAIFSHVPLVHLLAASHASKSWKRAVFSSLSHVNPIKPWLIILTQCPRAPHLITTHAYDPRSHVWLEIKQKPSMPIKHASAVRSSHSTFLYTLSPAEFAFSLDPLHLKWHHAPPPTVWRTDPIVACVGNHIVIAGGACDFEDDPLAVETYDTVKNAWVTCQSMPELLKGSTASTWLSVAVVGDTMYLTEKYSGMTYTFNPIANLWNGPFDMRPDQNVMFCVTGTLRKRLAVAGVVGEGENMKGVKIWVVKGELGSGMGMEELGEMPKEMVEKIMGGSEFGLGSVVVTWVGDFVYVWNSINWKEVMMCEVVNGSTCEWKSVNNVAVNERTRMKRVVLSSADVCFENLRREVGICMTVV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0530 373 SUPERFAMILY Kelch motif 54 342 IPR015915 GO:0005515
Lal16g0530 373 Gene3D - 52 353 IPR015915 GO:0005515
Lal16g0530 373 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 7 365 - -
Lal16g0530 373 Pfam F-box domain 14 44 IPR001810 GO:0005515
Lal16g0530 373 SUPERFAMILY F-box domain 14 63 IPR036047 GO:0005515
Lal16g0530 373 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 7 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0530 Lal-Chr16 3384333 3385454 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0530 - - ccaj:109800389 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0530 16 3384333 3385454 Lal16g0530 16 3384333 3385454 ECH