Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0494 ATGATCACATTTTATTCGTTTTCAGCCATTATCTTTTCTTTCCTCAATTTCTTTTGTAAACCAAAGACAGTGTCAAAGGACAGAGATATTATAAATACAAAGGTTGATAATGGTGATGGGGTTTGCTTTCTTCTTCTTCTTCTCTCTTCTTATCGTCCATTAGTTCATATTCACACTAAAGGGCAAAAGGGACCACTTTCCAGATCCAAGGTCGAATTCCCTCTTGCCCATGATAATGGAGCTTGGGAATGGAATCCTATAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTCTGCAACGTGAAACTCCAACATCACAACTTTCTGAATTGTGGTCACCTCTGGAGTTCCAAGGATGGAAACCTTGTGTCGAATCTAGAAAGCCAATTTATCTAATCTTCTTTTATGTGACTGACCCTCGAATCAAAGCAGCATTACCAGAGAAGTCCGAGGGATACATCCAAGTATTTCTCGATGGCGGTTTGAACCAGCAAAGAATGGGGATCTGTGATGCAGTTGCTGTTGCAAAGATACTGAATGCAACTCTTGTGATTCCATACCTTGAATTAAACCCTGTTTGGAAAGATTCAAGCTCCTTCATGGATATATTTGATGTGGATCACTTCATTGATGTATTGAAGGGTGATATTTCTATTGTTAAAGAGCTCCCTGAAGAGTATTCATGGAGCACAAGAGAGTACTATTCTATTGCCGTGCGAGAAACCAGAATCAAAGCTGCACCTGTACATGCAACAGGTCACTGGTATCTGGAAAATGTTTTGCCTGTCCTACAAAGTTATGGCCTTGCTGCAATCTCTCCTTTTTCCCACCGTCTATCTTTTGACAATGTGCCTATGGAAATCCAGCACCTTCGCTCTAAAGTCAACTTTGAAGCTTTAATCTTTGTTCCTCACATCAGAACACTTGGAGATGCTCTTATCAGCCGCCTTCGCTATCCACAAGGCTCTGCAGAAGAAATAGGCAGTAATTACCTGCAAGAGGTTACTGATGCAGGTCATAACAAGAAGCCCATGAAATTTGTTGTACTACACCTCCGATTTGATAAGGATATGGCAGCTCATTCAGCCTGCGATTTCGGTGGCGGGAAAGGTGAAAAATTGGCCCTTGCAAAGTATAGACAGGTGATTTGGCAGGGAAGGGTTCTTAATTCTCAATTCACTGATGAAGAGTTGAGGAGTCAAGGTCGTTGCCCAATGACTCCAGAAGAGATTGGATTGTTGCTAGCAGCATTGGGATTTGACAACAGCACTCGTTTATATCTGGCCTCTCACAAGGTCTATGGTGGAGAAGCAAGGATTTCAACTTTGAGGCAATTATTTCCTCTGATGGAAGACAAAAAGAGCCTTACTTCACCTTTAGAACGTTTTCTGATAAAGGGAAAAGCTTCACTATTAGCTGCAGTTGATTACTATGTTGGTATGCATAGTGACATCTTCATATCTGCCTCCCCAGGAAACATGCACAATGCAATGGTTGGACACAGAACTTACTTGAACTTAAAGACTATAAGGCCAAACATGCAATTAATGGGTCAACTTTTCTTGAATAAAGCCATTGAGTGGACAGAGTTCCAGCAAGCAGTGATTGAAGGACACCAAAATAGACAAGGTCAAAGCCCAGAGATGGGGGAAGAGGAGGAGAATGTGAAGAAAAGGGCATTGCAGATTATTGCAACTTTTCAGAACCTCCCTCGTCTCATCGTCTTTGATCTCGATTACACACTCTGGCCTTTCTACTGTGAGTGCTATTATGAAGATGAAATGCCTTATCTGTATCCACAAGCTAGAGGCATACTCTGTGCACTTAAGGAGAAGGGAATAGATATGGCAATTGCTTCTAGATCTCCTACACCAAAAATAGCAAAAACGTTTCTTGATAAGTTGGGCATTCCGTCACTGTTTGTGGCACAGGAAATTTTTTCCAGTTGGACTCATAAAACAGATCATTTCCAAAGAATCCATAGGAAAACTGGAATTCCTTACGGTTCAATGCTATTCTTTGATGATGAGGATAGGAACATTGAAGCAGTCTCTAAAATGGGTGTGATAAGCATTCTGGTTGGCAATGGAGTGAACCTTGAGGCCTTGAGGAAAGGATTGTCAGAATTTTCACAGAATTTAGGCTCCTCAAGCAGTAGCTGA 2163 0.4161 MITFYSFSAIIFSFLNFFCKPKTVSKDRDIINTKVDNGDGVCFLLLLLSSYRPLVHIHTKGQKGPLSRSKVEFPLAHDNGAWEWNPIKPRHSRLLRSALQRETPTSQLSELWSPLEFQGWKPCVESRKPIYLIFFYVTDPRIKAALPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWKDSSSFMDIFDVDHFIDVLKGDISIVKELPEEYSWSTREYYSIAVRETRIKAAPVHATGHWYLENVLPVLQSYGLAAISPFSHRLSFDNVPMEIQHLRSKVNFEALIFVPHIRTLGDALISRLRYPQGSAEEIGSNYLQEVTDAGHNKKPMKFVVLHLRFDKDMAAHSACDFGGGKGEKLALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEIGLLLAALGFDNSTRLYLASHKVYGGEARISTLRQLFPLMEDKKSLTSPLERFLIKGKASLLAAVDYYVGMHSDIFISASPGNMHNAMVGHRTYLNLKTIRPNMQLMGQLFLNKAIEWTEFQQAVIEGHQNRQGQSPEMGEEEENVKKRALQIIATFQNLPRLIVFDLDYTLWPFYCECYYEDEMPYLYPQARGILCALKEKGIDMAIASRSPTPKIAKTFLDKLGIPSLFVAQEIFSSWTHKTDHFQRIHRKTGIPYGSMLFFDDEDRNIEAVSKMGVISILVGNGVNLEALRKGLSEFSQNLGSSSSS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0494 720 Pfam GDP-fucose protein O-fucosyltransferase 153 505 IPR019378 -
Lal16g0494 720 CDD O-FucT_plant 153 510 IPR024709 -
Lal16g0494 720 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 553 717 - -
Lal16g0494 720 SFLD C1.5.2: MDP Like 553 717 - -
Lal16g0494 720 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 80 546 - -
Lal16g0494 720 PANTHER O-FUCOSYLTRANSFERASE 39 80 546 - -
Lal16g0494 720 Gene3D - 552 714 IPR023214 -
Lal16g0494 720 SUPERFAMILY HAD-like 571 707 IPR036412 -
Lal16g0494 720 CDD HAD_MDP-1_like 571 694 IPR035679 -
Lal16g0494 720 Pfam Acid Phosphatase 570 712 IPR010036 GO:0016791
Lal16g0494 720 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 573 687 IPR010033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0494 Lal-Chr16 3126147 3133772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0494 110 544 Miscellaneous Gene Families AT1G22460 32.579 5.84e-70 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0494 - - gmx:100817796 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0494 16 3126147 3133772 Lal16g0494 16 3126147 3133772 ECH