Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal16g0473 | ATGGAGAAAGGCGAGAACTCTTCCACCACCGAACAAGACTCATCCTTCGACGACCACAACCTAACCCTCTCTTTCGGCCTCACCCACGACGAGTTCCAAACCCTCAAACCCGCCATCAAGGAGTACCACACCTACACCTCAGGCCCCGGCCAATGCTCCACCCTCCTCGCTCAGCGCATCCACTCGCCGCCGCAAACTGTCTGGTCCGTCGTTCGCCGCTTCGACAAACCCCAGCTCTACAAGCACTTCATCAAATCCTGTTCCGTCAAGGAACCCTTTAACATGATTGTAGGGTGCACCAGGGAAGTTAACGTAATCTCCGGATTACCGGCTGCTACCAGTACCGAACGCCTCGACATATTAGACGATGACCGACACGTCACTGGTTTCAGCATCACTGGAGGCGAACACCGACTCAGAAATTACTGCTCCGTCACCTCGGTTCACGGGTTCGACCGTGACGGTGAGATCTGGACCGTTGTTCTGGAATCTTATATAGTTGATGTGCCTGAGGGTAACACTGAAGAGGACACGCGTCTCTTCGCTGATACAGTTGTCAAACTTAATCTCCAGAAGCTCGCGTCTTTAACTGAAGGGATGAACCGTGACGCTGACACTAAGTAA | 624 | 0.5304 | MEKGENSSTTEQDSSFDDHNLTLSFGLTHDEFQTLKPAIKEYHTYTSGPGQCSTLLAQRIHSPPQTVWSVVRRFDKPQLYKHFIKSCSVKEPFNMIVGCTREVNVISGLPAATSTERLDILDDDRHVTGFSITGGEHRLRNYCSVTSVHGFDRDGEIWTVVLESYIVDVPEGNTEEDTRLFADTVVKLNLQKLASLTEGMNRDADTK | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal16g0473 | 207 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 58 | 196 | IPR019587 | - | |
| Lal16g0473 | 207 | Gene3D | - | 14 | 207 | IPR023393 | - | |
| Lal16g0473 | 207 | CDD | PYR_PYL_RCAR_like | 52 | 198 | - | - | |
| Lal16g0473 | 207 | PANTHER | ABSCISIC ACID RECEPTOR PYL1 | 25 | 205 | - | - | |
| Lal16g0473 | 207 | SUPERFAMILY | Bet v1-like | 52 | 195 | - | - | |
| Lal16g0473 | 207 | PANTHER | - | 25 | 205 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal16g0473 | Lal-Chr16 | 2933170 | 2933793 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal16g0473 | K14496 | - | qsu:112029640 | 328.946 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal16g0473 | 16 | 2933170 | 2933793 | Lal16g0473 | 16 | 2933170 | 2933793 | ECH | |
| Lal16g0473 | 16 | 2933170 | 2933793 | Lal23g1111 | 23 | 12698893 | 12699525 | LSH |