Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0449 ATATATTTGAAGAAGAGAGAGAGAGAGAGAGAGGATTTATATAGAGCCTGCCTCTATCTGTCAATAATCTCTGTACTTCTCTCTCCTCACGATAAGGAAGAGAAGGAAGGAGGAGAAACAAGAAATATGGGAACAGAGAATGAGGCGGTGCAAGTTCAACAACAACCTGCGCCTATTGCATCCAAATTCCCATTCACTTTTTGGGAAGCCACTGTGGCTTCAACGGTGTTATTGGGATTCTTATTCGGCTTCGCTGCTGTTTATTTAACGTTGCCCGATTCCGATTACAGTTTTCTCAAGCTCCCTCGCACTCTCCAAGATCTTCAACTTTTACGAGATAACCTTGAGAACTATACAAGTGACTACACGGCACAAGTGTTGGTGGGATACTGCGTGGTATATATTTTCATGCAGACTTTCATGATTCCAGGGACTGTGTTCATGTCATTGCTTGCCGGAGCACTCTTTGGAGTCTTTAAAGGTGTAGCTCTGGTTGTGTTCACTGCCACATCTGGAGCTTCTTCATGTTATTTCTTGTCAAAAATGATTGGTCGACCCCTTCTCTCCTCTCTTTGGCCAGACAAGTTGAAATTCTTCCAAAACCAGGTGGCTAGGCGAAGAAAGGGTTTGTTGAACTACATGCTTTTTCTAAGACTGACTCCAACCTTACCTAACACATTCATTAATTTTGCTTCGCCAATCGTGGATGTGCCTTATCATATTTTCTTTCTCGGAACTGTTATTGGACTAATCCCTGCTGCTTATATCACTGTCAGGGCTGGGTTAGCTCTGGGAGAGTTGGAATCCGTAGGGGATCTTTATGATTTCAATTCAATTGCTACATTGTTCCTTATAGGTGTTGTTTCAGTCACACCTACATTAATGAGCAAGAGTGAGTCATAG 903 0.4264 IYLKKREREREDLYRACLYLSIISVLLSPHDKEEKEGGETRNMGTENEAVQVQQQPAPIASKFPFTFWEATVASTVLLGFLFGFAAVYLTLPDSDYSFLKLPRTLQDLQLLRDNLENYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATSGASSCYFLSKMIGRPLLSSLWPDKLKFFQNQVARRRKGLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAYITVRAGLALGELESVGDLYDFNSIATLFLIGVVSVTPTLMSKSES 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0449 300 Pfam SNARE associated Golgi protein 142 261 IPR032816 -
Lal16g0449 300 PANTHER SNARE ASSOCIATED GOLGI PROTEIN-RELATED 43 298 - -
Lal16g0449 300 PANTHER - 43 298 IPR045014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0449 Lal-Chr16 2789227 2792529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0449 - - gmx:100793859 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0449 16 2789227 2792529 Lal16g0449 16 2789227 2792529 ECH
Lal16g0449 16 2789227 2792529 Lal15g0400 15 2721758 2724822 LSH