Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0427 ATGAATCGCCACCATGATCCCAACCCTTTCGACGAAGAAGAAGTCAATCCATTTTCGAACCGTGCCGCTGCTCCTGGCTCAAAATTTGGTAATCCACCATTGGCGCCTGAAGTACAAATGGGGTTTGGACAAAGACACGATGCTACAGTCGATATACCTTTAGATACTTCGAATGACTCTAAGAAAAAAGGACAAGAGCTAGCAGCTTGGGAAGCGGATTTAAAAAGGAGAGAGATGGAAATAAAAAGAAGAGAAGAAACTGTTACTAGAGCCGGTGTAACTGTTGACGATAAGAATTGGCCTCCATTTTTCCCAATCATTCATCATGATATAGCCAATGAGATACCTGTTCATGCTCAAAGGCTGCAATATTTGGCCTTCGCCAGTTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAACTTAGTTGCTGTGATTGTCTGTTGGGTCAGAGGCGGCGGTTCTAAAATATTTTTCCTTGCGGTGATTTATACTCTACTTGGAGTTCCCCTTTCATATGTGCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTCACTTGGTTTTTCTTGTTCTACTTGCTTCACATTGCATTTTGTATCTTCGCCGCGATCGCACCTCCAATTGTTTTTCATGGAAAATCATTAACAGGCATCCTTGCAGCAATTGACGTCTTCTCAGACCATGTATTGGTTGGGATATTCTACTTGGTTGGATTTGGCCTGTTTTGCTTGGAGTCTCTTCTAAGCCTGTGGGTGCTTCAGAAAATATATATGTATTTCCGAGGGCATAAGTGA 813 0.4268 MNRHHDPNPFDEEEVNPFSNRAAAPGSKFGNPPLAPEVQMGFGQRHDATVDIPLDTSNDSKKKGQELAAWEADLKRREMEIKRREETVTRAGVTVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNLVAVIVCWVRGGGSKIFFLAVIYTLLGVPLSYVLWYRPLYRAMRTDSALKFTWFFLFYLLHIAFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGLFCLESLLSLWVLQKIYMYFRGHK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0427 270 Coils Coil 67 87 - -
Lal16g0427 270 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 270 - -
Lal16g0427 270 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 270 IPR007273 GO:0015031|GO:0016021
Lal16g0427 270 MobiDBLite consensus disorder prediction 1 39 - -
Lal16g0427 270 Pfam SCAMP family 98 268 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0427 Lal-Chr16 2587470 2593642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0427 1 270 Miscellaneous Gene Families AT1G32050 72.794 4.38e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0427 K19995 - gmx:100780723 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0427 16 2587470 2593642 Lal16g0427 16 2587470 2593642 ECH
Lal16g0427 16 2587470 2593642 Lal23g1144 23 12914815 12921634 LSH