Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0425 ATGGCAACCTTGACTGATATTGGTGTCTCAGCTGCTATCAACATACTCACAGCTTTTGCTTTTTTACTAGCTTTTGCTTTTCTCAGAATACAACCGATCAATGACAGAATCTACTTTCCAAAGTGGTATATTAGTGAAGGAAGAACTAGCCCAAGAAAGAGTATTCATAATTTTGTGGGCAAATTTGTGAACCTTAATTTCAGGACTTACCTCCAATTCTTGGATTGGATGCCTCAGGCTCTTAGAATGAGTGAGGATGATATTATTAACCATGCTGGTCTTGACTCTGCTGTTTTCCTTAGAATATATATTATTGGCTTAAAGATTTTTGTTCCAGTGACAGTTGTGGCACTCCTTGTTCTTATTCCAGTCAATGCATGGAGTGGGATACTGTTTTTCCTAAAAAAAGAGTTGGTGGTGAGTAATATTGATAAGCTATCAATATCAAATGTTCCACCTCAATCTATAAGATTTTTTGTTCATATAGCACTGGAGTACCTGATCACAGTATGGGTTTGTTTCCTTCTCTACAAAGAATACAGTAATATATCAACTATGAGATTGCATTTCTTTGCTTCACAAGGCAGGCGCGTGGAGCAATTCACGGTTGTTGTCAGGAATGTCCCTCATACTGATGGGTGCTCAGTTGCTGATTCTATCGATAACTTCTTTAAAAAAAACCACCCTCATCACTATATTGGACACCAGGCTGTCTATGATGCAAACAAGTTTACTAGATTAATGAGAAAAAGAGATAGGCTCCAAAATGGGCTCGACTATTACCAGGTCGAGTCTGAAAAGCATCCCAACAAGAAGCCAACTATCAAGACAGGATTTTGCGGTCTTTGGGGCCGGAAAGTTGATGCTGTTGAGTGTTACAGACACATGATTGCAGAACTTGATAAAATTATGACATTGGAGCGACAGAAACTCATAAAAGACCCGAAATGTATTTTGCCTGTCGCTTTTCTTTTATTCAATTCACGTTGGGGAGCATCGGTTTGTGCTCAAACTCATCAAAGCAAAAATCCAACACTGTGGTTGACTGGTTGGGCTCCAGAGCCACATGATGTTTATTGGCAGAACCTGTCCATACCTGTATTTTCTTTGGGCATTCGGAAACTGATAGTATCATCGTTTATGTTTGCTTTAATATTATTCTACATGATCCCCATTGCTTTCGTTCAATCACTTGCAAATTTGGAGGGTCTTGAAAGAGTTGTTCCTTTTCTCAGACCAGTAATAGAATTGAGATTTATCAAGTCTTTTCTTCAAGGTTTTCTTCCTGGTTTGGCTCTCAAATTATTTTTGTACATTGCTCCAGCAATTCTGATGATCATGACAAAAGTTGAAGGATATATTGCATTGTCAACGCTGGAGCAGAAGACAGCATCAAAATATTATTATTTTATGCTGGTGAATGTTTTCTTGGGAAGCATAGTAACCGGGGCTGCATTTGAGCAACTGAATTCATTCCTTCGCGAGCCACCGGCAGAGATTCCTAGAACAATTGGAATTGCCATTCCAATGAAGGCTACCTTTTTTATTACTTTCACAATGGTTGATGGATGGGCTGGAATTGCTAGTGAGATCCTCAGATTAAAGGCAATGGTTTTATATCATCTCAAGAACATGATCATAGTTAAAACTGAGAGAGATAGAGGAAAGGCCATGGACCCTGGGGGTGTAGACTATATGCAGATTATTCCAAATCTTCAACTATACTTCCTTCTTGGAATTGTGTATGCTGTCGTGTCTCCCGTCCTGCTTCCTTTCATACTGATCTTCTTTGCCTTTGCATATTTGGTTTACCGCCATCAGATAATCAATGTCTACAATCAACAGTATGAAAGTGCTGCTGCATTCTGGCCACATGTTCATAGCCGCATTATAGCAAGTTTGATAATATCACAGCTTCTTTTGATGGGTCTGCTTAGTACCAAAAAGGCGGTTAAATCTACACCTTTGCTTGCTATCTTACCAATACTGACATATGCATTTCACAAGTACTGTCAGGGTCGATTTGAGCCAGCATTTAGGCAGAACCCACTTGAGGAAGCAATGGAAAAGGATTTGTTGGAGAAAAACACAGAACCTGACTTGAACATAAAGGCATATCTAGCAGATGCTTACTTGCATCCAATTTTGCAGTCATTTGAAAAAGAAGAACAAGATTTAGTTGAAGTGAGAGTAGACAAACAAGAAACTGAAATAGATAGTTCCTCATCAAGTGAGATGAGTCCTTCCTCCCCATCCCATCATCAACAACAACCACCTTCCCCTCCCTACCACCCAGGTTTTTCCCACCATCTTCCCAATCCTCCTCAATATGGCTATGAATGA 2343 0.3956 MATLTDIGVSAAINILTAFAFLLAFAFLRIQPINDRIYFPKWYISEGRTSPRKSIHNFVGKFVNLNFRTYLQFLDWMPQALRMSEDDIINHAGLDSAVFLRIYIIGLKIFVPVTVVALLVLIPVNAWSGILFFLKKELVVSNIDKLSISNVPPQSIRFFVHIALEYLITVWVCFLLYKEYSNISTMRLHFFASQGRRVEQFTVVVRNVPHTDGCSVADSIDNFFKKNHPHHYIGHQAVYDANKFTRLMRKRDRLQNGLDYYQVESEKHPNKKPTIKTGFCGLWGRKVDAVECYRHMIAELDKIMTLERQKLIKDPKCILPVAFLLFNSRWGASVCAQTHQSKNPTLWLTGWAPEPHDVYWQNLSIPVFSLGIRKLIVSSFMFALILFYMIPIAFVQSLANLEGLERVVPFLRPVIELRFIKSFLQGFLPGLALKLFLYIAPAILMIMTKVEGYIALSTLEQKTASKYYYFMLVNVFLGSIVTGAAFEQLNSFLREPPAEIPRTIGIAIPMKATFFITFTMVDGWAGIASEILRLKAMVLYHLKNMIIVKTERDRGKAMDPGGVDYMQIIPNLQLYFLLGIVYAVVSPVLLPFILIFFAFAYLVYRHQIINVYNQQYESAAAFWPHVHSRIIASLIISQLLLMGLLSTKKAVKSTPLLAILPILTYAFHKYCQGRFEPAFRQNPLEEAMEKDLLEKNTEPDLNIKAYLADAYLHPILQSFEKEEQDLVEVRVDKQETEIDSSSSSEMSPSSPSHHQQQPPSPPYHPGFSHHLPNPPQYGYE 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0425 780 MobiDBLite consensus disorder prediction 754 769 - -
Lal16g0425 780 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 754 IPR045122 GO:0005227
Lal16g0425 780 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Lal16g0425 780 PANTHER TO DEHYDRATION PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 754 - -
Lal16g0425 780 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
Lal16g0425 780 MobiDBLite consensus disorder prediction 729 780 - -
Lal16g0425 780 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0425 Lal-Chr16 2572193 2578401 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0425 K21989 - gmx:100818689 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0425 16 2572193 2578401 Lal16g0425 16 2572193 2578401 ECH
Lal16g0425 16 2572193 2578401 Lal15g0368 15 2482425 2488590 LSH