Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0421 ATGGGAAAAAGCAAGGTTCTTGTTGTTGGAGGAACAGGTTATGTTGGGAGGAGGATAGTGAAGGCAAGCCTAGAACATGGGCATGAAACCTTTATTCTTCAAAGGCCAGAGATAGGCTTAGATATTGAAAAGCTACAGATTTTGCTATCATTCAAGAAACAAGGTGCTATTCTGGTGGAGGCTTCTTTCTCTGATCATAAGAGCCTAGTAGATGCTGTGAAACTAGTAGATGTTGTGATTTGCACCATGTCTGGTGTTCATTTTCGGTCTCACAACTTATTAACTCAGCTCAAACTTGTTGAAGCAATCAAGGATGCTGGAAATATCAAGCGTTTCCTCCCTTCAGAATTTGGTATGGACCCAGCACTTATGGGACATGCACTTGAACCAGGACGTGTGACATTCGATGAGAAAATGACTGTAAGAAAAGCAATTGAAGAAGCCAACATTCCTTTCACTTACATTTCTGCTAATTGCTTTGCTGGCTACTTTGCTGGTAACCTCTCTCAGATGAAGACCCTTCTCCCTCCTAGAGACAAAGTCCTTCTCTATGGAGATGGTAATGTCAAAGCTGTTTATATGGATGAAGATGATGTAGCAACATACACAATTAAGACAATTGATGATCCTAGAACATTGAACAAAACTGTGTACTTAAGGCCACCAGAAAACATTCTCACTCAAAAAGAGCTGATTGAGAAATGGGAGGAACTTATAGGAAAGCAACTAGAGAAAAACAGCATATCTGAAAAAGATTTCCTTTCTACTTTAAAAGGTTTGGATTTTGCAAGCCAAGTGGGAGTGGGGCATTTCTATCATATTTTCTATGAAGGGTGTTTGACAAACTTTGAAATAGGAGAAAATGGAGAAGAAGCCTCAGAGCTTTATCCAGAGGTGAATTATACTCGCATGGATCAATATCTAAAAGTCTATGTGTGA 939 0.3951 MGKSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKAVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTQKELIEKWEELIGKQLEKNSISEKDFLSTLKGLDFASQVGVGHFYHIFYEGCLTNFEIGENGEEASELYPEVNYTRMDQYLKVYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0421 312 Gene3D - 4 297 - -
Lal16g0421 312 PANTHER PINORESINOL REDUCTASE-RELATED 2 311 - -
Lal16g0421 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Lal16g0421 312 PANTHER PINORESINOL-LARICIRESINOL REDUCTASE-LIKE PROTEIN 2 311 - -
Lal16g0421 312 Pfam NmrA-like family 6 299 IPR008030 -
Lal16g0421 312 Gene3D - 158 308 - -
Lal16g0421 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 258 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0421 Lal-Chr16 2546844 2548800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0421 K21568 - gmx:100775382 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0421 16 2546844 2548800 Lal16g0421 16 2546844 2548800 ECH