Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0418 ATGTCGTCGAAGGTTGTTTATGAAGGTTGGATGGTGCGGTATGGCCGAAGAAAGATTGGGCGATCGTTCATCCACATGAGGTATTTCGTGCTCGAGTCGCGGTTGCTCTCTTACTATAAGAGGAAACCACAGGATAATCAGGTTCCTATTAAAACACTGCTAATAGATGGAAACTGTAGAGTGGAGGATAGAGGCTTGAAGACCCATCATGGACATATGGTTTATGTTTTGTCCGTTTACAACAAGAAAGAAAAGTATCATCGAATTACGATGGCAGCATTTAACATTCCAGAGGCACTAATCTGGAAGGAAAAAATTGAGTATGTCATTGACCAGCATCAGGGAGCACAACCATCAAATGGTAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAACGGGAAGACGGCTTCTTCGTCAGACCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAGGATGAGGTTCATCCAAATTTGTTAAGGAGGACAACAATTGGAAACGGTCCTCCAGAATCAATTTTTGACTGGACAAGGGAAATAGATTCAGATTTGTCAAATCAGAATATCAATAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAATGCGAAAATGGACTTCGCATCTTTGAGGAACTTCTTGAAGTTGATTACCTGCCTAGGAGCTGTAGTAGAGCCATGAAGGCAGTAGGTGTTGTGGAGGCCACATGTGAAGAAATTTTTGAGCTTGTGATGAGCATGGATGGGACACGATGGGACTGCAGTTTCCAACATGGTAGTTTAGTCGAGGAGGTGGATGGGCATACGGCAGTTCTTTATCACCGACTTCAGCTAGATTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGTTATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTCTATTTCGCTCTAGGGAACATGAGAATTGTAGTCCACAGCCAGGGTGTGTTCGGGCAAATATTGAGAGTGGAGGGTTTAACATTTCCCCCTTGAAACCTAGAAACGGAAGGCCCAGGACACAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGCTGGGGTGTAGGTTACATGTCATCTTTTCAGCAGCACTGTCTCCGTCAAATGTTAAATTGTGTAGCTGGTTTACGTGAATGGTTCACCCAAACAGATGAAAGGAATGCTCCACCACGAATTCCTGTCATGGTTAATATGTCATCAGCGTCTGTCTCTTCAAAGAAGAGTCTGAAGCCAAATGATTCTTCTGTTCATCCTCCTTCTCTCGATCAATTAAATTCTGCAAGCAGAAATTCTGCCTATCAGGATGAATATTCTGATGAAGATGAGGATTTCCAAATAGCGGAACCTGAGCAAGAGGTTGCTTACCCAATTGACCATGAAAATGATGCCAGAAGAACAGTCTTGGAAGAAGAGCCTGCAAATGAAATTGACTTGTCTTCCTTTATGGGTAATTTACGCCGTGATGATCGTGATAATGCTCGTAATTGCTGGAAAATTTCTGATGGAAATAACTTCAGAGTCAGAAGCAAGCATTTTTGCTATGACAAGTCTAAGGTTCCTGCGGGCAAACATCTATTGGATCTTGTTGCTGTTGATTGGTTGAAGGACTCAAAAAGAATGGATCATGTGGCTAAGTGTCATGGTTGTGCAGCACAAGTTGCATCAGAAAAAGGATTTTTCTCCATTATCATTAATCTTCAAGTGCCTGGATCCACACACTATAGTATGGTATTTTATTTTGTGACAAGGGAATTAGTTCCTGGGTCCCTCTTGCAACGCTTTGTTGATGGTGATGATGAATTCCGAAACAGTAGGTTGAAGCTCATCCCGTCAGTCCCAAAGGGCTCTTGGATTGTGCGCCAGAGTGTTGGGAGTACTCCTTGTATACTTGGAAAGGCAGTTGATTGCAACTATATTCGTGGTCCCAAGTATTTAGAAATTGATGTTGATATCGGTTCTTCTACTGTTGCTAATGGAGTTTTGGGGTTGGTTGTTGGTGTGATTACATCATTGGTGGTTGATATGGCTTTTCTTATACAGGCAAATACACCTGATGAGTTGCCTGAGAAGCTTATTGGAGCAGTTCGAGTCTCTCATTTAGAGCTCAAATCTGCCAGAGTCCCAAAACTGGATCCAGATCCATCATGA 2175 0.4267 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLSYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIPEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDEVHPNLLRRTTIGNGPPESIFDWTREIDSDLSNQNINNQAFSRKHWRLLQCENGLRIFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRWDCSFQHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRANIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYMSSFQQHCLRQMLNCVAGLREWFTQTDERNAPPRIPVMVNMSSASVSSKKSLKPNDSSVHPPSLDQLNSASRNSAYQDEYSDEDEDFQIAEPEQEVAYPIDHENDARRTVLEEEPANEIDLSSFMGNLRRDDRDNARNCWKISDGNNFRVRSKHFCYDKSKVPAGKHLLDLVAVDWLKDSKRMDHVAKCHGCAAQVASEKGFFSIIINLQVPGSTHYSMVFYFVTRELVPGSLLQRFVDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCILGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVVGVITSLVVDMAFLIQANTPDELPEKLIGAVRVSHLELKSARVPKLDPDPS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0418 724 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Lal16g0418 724 SUPERFAMILY PH domain-like 2 120 - -
Lal16g0418 724 SUPERFAMILY Bet v1-like 185 363 - -
Lal16g0418 724 MobiDBLite consensus disorder prediction 135 158 - -
Lal16g0418 724 MobiDBLite consensus disorder prediction 412 452 - -
Lal16g0418 724 Gene3D - 1 120 IPR011993 -
Lal16g0418 724 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 4 721 IPR045096 -
Lal16g0418 724 MobiDBLite consensus disorder prediction 412 442 - -
Lal16g0418 724 Gene3D - 201 399 IPR023393 -
Lal16g0418 724 PANTHER PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKE 4 721 - -
Lal16g0418 724 SMART START_1 181 391 IPR002913 GO:0008289
Lal16g0418 724 ProSiteProfiles START domain profile. 201 361 IPR002913 GO:0008289
Lal16g0418 724 CDD START 193 362 - -
Lal16g0418 724 Pfam START domain 227 364 IPR002913 GO:0008289
Lal16g0418 724 SMART PH_update 5 113 IPR001849 -
Lal16g0418 724 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 506 709 IPR009769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0418 Lal-Chr16 2528336 2540778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0418 - - aprc:113868395 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0418 16 2528336 2540778 Lal15g0364 15 2449601 2462085 LSH