Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0390 ATGGAAAGTCATGTTAGATGCAAATTTTCAGTTATATTCCCCAACATAATCTCCATCTCGTTTGGCATAGTTTCCTTTTCCTTGTGTATAGCCTCAGAGATTATGAGGAACAAGACTAAGGATCTGAGATGGAATGGGAAACTATGTTATTTGCCATCAAGCCAAGCATTTGGGTTGGGAATTGCAGCTCTGGTTTGTTTATTTTTGGCTCAGATCATTGGGAATTGTATTTTATTCAAGAACTCTTGTTCAAGAAGGAAAAGAAACGCTCAGTATAAGATTCCTGTCATTGCAAAGCTTCTACTTTTGATCTCTTGGGTTAGCTTTGGAATTGCAATTATTATGTTGATAGCAGCTACAAGCATGAACAGAGTGCAACCCTATGGGGTAGGATGGTTGAATGGTGAATGCTACCTAGTCAAACGTGGGACTTATGCAGGCTCAGCCATATTGGTTCTAGCTACAGTAGGTTCGGTAATTGGTTCAACTTTGTCAACAATAAAGACCAATCAAGCAGACCAGGGTAGCAAAATACATGAACAAATGGGGTGA 552 0.3949 MESHVRCKFSVIFPNIISISFGIVSFSLCIASEIMRNKTKDLRWNGKLCYLPSSQAFGLGIAALVCLFLAQIIGNCILFKNSCSRRKRNAQYKIPVIAKLLLLISWVSFGIAIIMLIAATSMNRVQPYGVGWLNGECYLVKRGTYAGSAILVLATVGSVIGSTLSTIKTNQADQGSKIHEQMG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0390 183 Pfam Protein of unknown function (DUF1218) 63 156 IPR009606 -
Lal16g0390 183 PANTHER OS07G0462200 PROTEIN-RELATED 15 177 - -
Lal16g0390 183 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 15 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0390 Lal-Chr16 2356497 2358411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0390 - - gmx:100500694 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0390 16 2356497 2358411 Lal16g0390 16 2356497 2358411 ECH
Lal16g0390 16 2356497 2358411 Lal15g0330 15 2225013 2230519 LSH
Lal16g0390 16 2356497 2358411 Lal23g1168 23 13075061 13076893 LSH