Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0387 ATGGCTTTGACAAAAGGGTGTGATGAAGTTGTTCATTCTCGTCCCCTGTTCCTCACGATCTACACCTTTGTCGTTGTTGGAATCGTTGTTTCCTCACTATATATCTTCTCTGCATTATACTCTAACAACACTTCTTCTGTTCTGTCCTCTTTCTCTTCCTCTTCCCCTTCAGGTGAGGAACCTCATCTCACAGATCAAATACTCAATGTTTCTCAATCAAAAACTGTGCATGCTGTGTCCTCTCCTCCCCCAGAGCCACAAAATGTATGGACAAGACCAACTTTTGATGTTCCTCCACACAATAAAAAGATGCCGCCTTTGGAGTCTTTCCGACTTACCAAAGAACTGGTTCAGCAAAGAGTGAAAGATAACATTATAATAGTCACCTTTGGTAACTATGCATTCATGGACTTTATTCTTACTTGGGTTAAACATTTGACAGAGCTGGGACTTACTAATTATCTTGTTGGTGCAATGGACACCAAATTATTGGAGGCACTGTATTGGAAAGGGTTACCAGTTTTTGACATGGGCAGCCATATGAGCACAATAGATGTTGGTTGGGGGTCTCCAACATTTCATAAAATGGGGAGAGAGAAAGTCATTCTGATAAACTTGATGCTGCCTTTTGGTTATGAGCTGTTAATGTGTGACACTGACATGGTTTGGTTGAAGAATCCACTTCCATATATTGCTCATTATCCTGAAGCCGATGTTTTAACATCCAGTGATCAAGTTATACCAACAGTTGTTGATGATAGTCTGGAAGTTTGGGAAGAAGTTGGTGCTGCCTACAACATAGGAATTTTTCATTGGAGACCTACAGAGTCTGCAAAAAAATTGGCAAAGGAATGGAAAGAACTGCTTCTATCTGATGAAAAGATATGGGATCAGAATGGGTTTAATGATATTGTACACAGGCAGTTGGGACCATTAGTTGATGAGGACAGTGGACTTGTTTATGCTTATGATGGAAATCTTAAGTTGGGAATTTTGCCTGCAAGCATCTTCTGTAGTGGGCATACATATTTTGTCCAAGCTATGCATCAGCAACTGAGGTTGGAGCCATATGCAGTGCACACAACATTTCAATATGCAGGCACTGCAGGAAAGCGCCACCGACTGCGAGAAGCCATGCTCTTCTATGATCCACCAGAATACTATAATCCTCCTGGGGGTTTCTTGTCATTTAGGCCATCTATTCCAAAAAGCTTGTTGCTAAATGGGAAGCATACCGTTGGATCACATTTTACTCTCATTAATTACCAAATGAAACAGATTAGAACAGCACTGGCAATTGCGTCACTTTTGAACAGAACACTGGTGAGAACTATTTCTGGGATGAGTACTGCTTTCAATGTTAACTTTTGCTGCAGTTGTCATGCTTCTGCTTCATGGTTCCTTGGTTCCATTGAAAACTACCAAAAGGTCATGCCTCCACTCTGGTGCAGGATTGATAGGCTATGGTTTCCCCATCCTGGTGTTTTGGAGGGGTCAATGACTAGGCAACCTTTTATCTGCCCTCTGGATCATGTATTTGAGGTGAATGTCATGCTGAAAGAACTCCCAGAGGAAGAGTTTGGCCCTAAAATAGACATCAGAGAGTACTCAATACTTGAAAATTCTGCTCTACCTGCAGAGGTGAAAAAGTCATGGCTGGATGTTCAGCTCTGTAAAGAAGGAACCAGAGATTGTAATGCATCAAATAATACCACTTTTGGGGGAGTACTTAAATTTCCAAAGCATAGCAATGAAGAAACGGAAAGGGAACAAAGATTCAGAAAACGTGTTAAACATTACGTTGGTATATGGTGCTGCGTGTTGGATCACACCCCTGGTCACATATATTATGATATGTACTGGGATGAGAAACCAGGATGGAAACCAATCCCTCCTCAAACTTCTGCAGATGACCATCCACCTTGGTGA 1929 0.4158 MALTKGCDEVVHSRPLFLTIYTFVVVGIVVSSLYIFSALYSNNTSSVLSSFSSSSPSGEEPHLTDQILNVSQSKTVHAVSSPPPEPQNVWTRPTFDVPPHNKKMPPLESFRLTKELVQQRVKDNIIIVTFGNYAFMDFILTWVKHLTELGLTNYLVGAMDTKLLEALYWKGLPVFDMGSHMSTIDVGWGSPTFHKMGREKVILINLMLPFGYELLMCDTDMVWLKNPLPYIAHYPEADVLTSSDQVIPTVVDDSLEVWEEVGAAYNIGIFHWRPTESAKKLAKEWKELLLSDEKIWDQNGFNDIVHRQLGPLVDEDSGLVYAYDGNLKLGILPASIFCSGHTYFVQAMHQQLRLEPYAVHTTFQYAGTAGKRHRLREAMLFYDPPEYYNPPGGFLSFRPSIPKSLLLNGKHTVGSHFTLINYQMKQIRTALAIASLLNRTLVRTISGMSTAFNVNFCCSCHASASWFLGSIENYQKVMPPLWCRIDRLWFPHPGVLEGSMTRQPFICPLDHVFEVNVMLKELPEEEFGPKIDIREYSILENSALPAEVKKSWLDVQLCKEGTRDCNASNNTTFGGVLKFPKHSNEETEREQRFRKRVKHYVGIWCCVLDHTPGHIYYDMYWDEKPGWKPIPPQTSADDHPPW 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0387 642 Pfam Nucleotide-diphospho-sugar transferase 151 375 IPR005069 -
Lal16g0387 642 PANTHER ARABINOSYLTRANSFERASE XEG113 466 587 - -
Lal16g0387 642 PANTHER ARABINOSYLTRANSFERASE XEG113 1 442 - -
Lal16g0387 642 PANTHER ARABINOSYLTRANSFERASE XEG113 587 642 - -
Lal16g0387 642 MobiDBLite consensus disorder prediction 77 99 - -
Lal16g0387 642 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 587 642 - -
Lal16g0387 642 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 1 442 - -
Lal16g0387 642 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 466 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0387 Lal-Chr16 2326274 2334515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0387 K20784 - gmx:100776463 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0387 16 2326274 2334515 Lal16g0387 16 2326274 2334515 ECH
Lal16g0387 16 2326274 2334515 Lal16g1776 16 16809627 16817996 PCT