Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0342 ATGGGTGATATTTTTGCATGGCTCATCTCCTTCTTCATCCTTATTGCCTTACTTGTCCTCGTCACTTACCAGCTAATGTGCTTGGCTGACCTCGAATTCGATTATATAAATCCTTATGAGTCTTCATCCCGAATAAACAAGGTGGTTTTGCCTGAGTTTATTACACATGGTGTCCTATGCTGTTTCTACCTTATTACAGGGCACTGGATTATGTCCCTGTTCGCTGCTCCTTACCTCTACTTCAATGTGCGATTGTATAGAGAACGAAAGCATTTAATTGATGTTACTGAGATATTCAACTTGCTCTCATGGGAAAAGAAGCAACGGCTTGTCAAACTCTTCTATCTTATTTTTACCCTTTTCTTCTCTGTATTTTGGATGATCTACACTTCAGTGGATGATTAA 405 0.3926 MGDIFAWLISFFILIALLVLVTYQLMCLADLEFDYINPYESSSRINKVVLPEFITHGVLCCFYLITGHWIMSLFAAPYLYFNVRLYRERKHLIDVTEIFNLLSWEKKQRLVKLFYLIFTLFFSVFWMIYTSVDD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0342 134 PANTHER CORNICHON-RELATED 1 134 - -
Lal16g0342 134 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Lal16g0342 134 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Lal16g0342 134 PANTHER CORNICHON FAMILY PROTEIN 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0342 Lal-Chr16 2054110 2066306 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0342 K20368 - gmx:100780362 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0342 16 2054110 2066306 Lal16g0342 16 2054110 2066306 ECH