Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0297 ATGGCTTGTTCTTCCAAAAGACATTGTTTTTTAGAAGAGGATGATGGTTTGGTTTCATTGGCAGACACTACTGATGTTGGGTATTATAGACAGCATCCTTACCATTACCAACATGGTTTTGTGTCTAGAACTTTGGGTTATGCTTACCCCTTTACATCTTCGACTAGATCTGCCAGATTTTATGATGCCAGATTTGAAGATCACATACCTCACTTTCTTGAAGCTTGTTTTCTTTGCAAAAAGCCTCTCGGAAACAATAGAGACATCTTCATGTACAGAGGGGACACACCTTTTTGCAGTGAAGATTGCAGATTAGAACAAATAGAGATGGACGAAGCCAAAGAGAAGAACAGAAACCTTTCTTCAATGAAGGCTTTGAGGAAAAAAGAGCAAAACAAATCTGCATCGCCAAACAAGACCCAAGATTATTCGATTCGTGCAGGGACAGTTGCTGCTGCTTAA 462 0.3983 MACSSKRHCFLEEDDGLVSLADTTDVGYYRQHPYHYQHGFVSRTLGYAYPFTSSTRSARFYDARFEDHIPHFLEACFLCKKPLGNNRDIFMYRGDTPFCSEDCRLEQIEMDEAKEKNRNLSSMKALRKKEQNKSASPNKTQDYSIRAGTVAAA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0297 153 PANTHER - 54 153 - -
Lal16g0297 153 MobiDBLite consensus disorder prediction 114 135 - -
Lal16g0297 153 Pfam zinc-finger of the FCS-type, C2-C2 63 114 IPR007650 -
Lal16g0297 153 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 54 153 IPR044533 -
Lal16g0297 153 Coils Coil 103 133 - -
Lal16g0297 153 ProSiteProfiles Zinc finger FLZ-type profile. 71 115 IPR007650 -
Lal16g0297 153 MobiDBLite consensus disorder prediction 114 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0297 Lal-Chr16 1794799 1796223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0297 - - gmx:100797178 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0297 16 1794799 1796223 Lal16g0297 16 1794799 1796223 ECH